Gene
RNA
| Item | Value |
|---|---|
| gene id | G72273 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 28526788 ~ 28578733 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU90338 | True | 504 | lncRNA | 0.44 | 2 | 28526788 | 28578733 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014720 | NA | coding | upstream | 42938 | 28456195 ~ 28483850 (+) |
| AMCG00014722 | NA | coding | upstream | 76681 | 28444976 ~ 28450107 (+) |
| AMCG00014721 | med14,LOC106581951 | coding | upstream | 85259 | 28407217 ~ 28441529 (+) |
| AMCG00014714 | rpl8,LOC107595836,LOC107748161 | coding | upstream | 194320 | 28329797 ~ 28332468 (+) |
| AMCG00014710 | cask | coding | upstream | 246064 | 28250926 ~ 28280724 (+) |
| AMCG00014724 | NA | coding | downstream | 4736 | 28583469 ~ 28590960 (+) |
| AMCG00014723 | NA | coding | downstream | 12345 | 28591078 ~ 28609187 (+) |
| AMCG00014726 | LOC103028151 | coding | downstream | 117078 | 28695811 ~ 28766090 (+) |
| AMCG00014725 | lrrc58,LOC106574305 | coding | downstream | 188702 | 28767435 ~ 28779290 (+) |
| AMCG00014727 | gsk3b,LOC107703010 | coding | downstream | 303184 | 28881917 ~ 28890968 (+) |
| G72208 | NA | non-coding | upstream | 185071 | 28337291 ~ 28341717 (+) |
| G72173 | NA | non-coding | upstream | 225975 | 28297669 ~ 28300813 (+) |
| G72169 | NA | non-coding | upstream | 229304 | 28240566 ~ 28297484 (+) |
| G72072 | NA | non-coding | upstream | 1047344 | 27475064 ~ 27479444 (+) |
| G71995 | NA | non-coding | upstream | 1499516 | 27026775 ~ 27027272 (+) |
| G72329 | NA | non-coding | downstream | 253023 | 28831756 ~ 28831975 (+) |
| G72341 | NA | non-coding | downstream | 340243 | 28918976 ~ 28921290 (+) |
| G72353 | NA | non-coding | downstream | 402389 | 28981122 ~ 28985576 (+) |
| G72354 | NA | non-coding | downstream | 410874 | 28989607 ~ 28991299 (+) |
| G72409 | NA | non-coding | downstream | 558396 | 29137129 ~ 29137353 (+) |
| G72175 | LOC102776245 | other | upstream | 222715 | 28302373 ~ 28304073 (+) |
| AMCG00014703 | ndp,LOC107565935,LOC106586792 | other | upstream | 646988 | 27868703 ~ 27879800 (+) |
| AMCG00014704 | fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 | other | upstream | 684917 | 27835503 ~ 27841871 (+) |
| AMCG00014687 | NA | other | upstream | 1615551 | 26904877 ~ 26911237 (+) |
| G71525 | NA | other | upstream | 5671142 | 22855342 ~ 22855646 (+) |
| AMCG00014729 | NA | other | downstream | 218316 | 28797049 ~ 28837910 (+) |
| AMCG00014739 | NA | other | downstream | 669142 | 29247875 ~ 29256354 (+) |
| AMCG00014738 | NA | other | downstream | 689596 | 29268329 ~ 29279149 (+) |
| AMCG00014757 | LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 | other | downstream | 1264734 | 29843467 ~ 29846586 (+) |
| G72605 | NA | other | downstream | 1272717 | 29851450 ~ 29851821 (+) |
