G72329


Basic Information

Item Value
gene id G72329
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 28831756 ~ 28831975 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU90404
ggggatcaaatacttttttccctcactgtatagtatGGGTAGAATGCGGTTCTGAATACAGCCCTACTCCTTCTCCGGGCAAGACATGCCCACACACGATTCAAAATGCTGGCATTGGTCGttggagtaactgtcaatcatgttttatgcagccaatcacttttcaggaCATTATTGTCAATCTTTTATTTAACACAACCAGTTACTTGCAGAAGACACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90404 True 220 lncRNA 0.42 1 28831756 28831975

Neighbor

gene id symbol gene type direction distance location
AMCG00014725 lrrc58,LOC106574305 coding upstream 52466 28767435 ~ 28779290 (+)
AMCG00014726 LOC103028151 coding upstream 65666 28695811 ~ 28766090 (+)
AMCG00014723 NA coding upstream 222569 28591078 ~ 28609187 (+)
AMCG00014724 NA coding upstream 240796 28583469 ~ 28590960 (+)
AMCG00014720 NA coding upstream 347906 28456195 ~ 28483850 (+)
AMCG00014727 gsk3b,LOC107703010 coding downstream 49942 28881917 ~ 28890968 (+)
AMCG00014728 gsk3b,LOC107559500,LOC107721573,LOC107551994,LOC107715908 coding downstream 73926 28905901 ~ 28916634 (+)
AMCG00014734 NA coding downstream 264154 29096129 ~ 29110638 (+)
AMCG00014733 NA coding downstream 288976 29120951 ~ 29129042 (+)
AMCG00014737 NA coding downstream 475965 29307940 ~ 29321592 (+)
G72273 NA non-coding upstream 253023 28526788 ~ 28578733 (+)
G72208 NA non-coding upstream 490039 28337291 ~ 28341717 (+)
G72173 NA non-coding upstream 530943 28297669 ~ 28300813 (+)
G72169 NA non-coding upstream 534272 28240566 ~ 28297484 (+)
G72072 NA non-coding upstream 1352312 27475064 ~ 27479444 (+)
G72341 NA non-coding downstream 87001 28918976 ~ 28921290 (+)
G72353 NA non-coding downstream 149147 28981122 ~ 28985576 (+)
G72354 NA non-coding downstream 157632 28989607 ~ 28991299 (+)
G72409 NA non-coding downstream 305154 29137129 ~ 29137353 (+)
G72415 NA non-coding downstream 325050 29157025 ~ 29160425 (+)
G72175 LOC102776245 other upstream 527683 28302373 ~ 28304073 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other upstream 951956 27868703 ~ 27879800 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other upstream 989885 27835503 ~ 27841871 (+)
AMCG00014687 NA other upstream 1920519 26904877 ~ 26911237 (+)
G71525 NA other upstream 5976110 22855342 ~ 22855646 (+)
AMCG00014739 NA other downstream 415900 29247875 ~ 29256354 (+)
AMCG00014738 NA other downstream 436354 29268329 ~ 29279149 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other downstream 1011492 29843467 ~ 29846586 (+)
G72605 NA other downstream 1019475 29851450 ~ 29851821 (+)
AMCG00014777 NA other downstream 1932376 30764351 ~ 30812287 (+)

Expression


Co-expression Network