G72353


Basic Information

Item Value
gene id G72353
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 28981122 ~ 28985576 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU90428
CTTCAGTTGGTGTGTtgtaacaagaaataaataaccttgTGTTCAAGCCATCTAACAGGATTAATATGTATACAAGACATGGAACAAAAGTCTTCTTTCGTTTGGTTTCGGAATCACAATGATGCCTGCAACTTTGCTGACTAAACATTTACTATTGACTGCATTTTGGCTCATCGTCATCTTTAACACCTCCTGCATATTCAGTAATCCCATTTTGTGTTCACTAATGATTTGCAAAGGCAAGattcaaggcacccagtgccagaggcagcaaGCAACCCCAAAC

Function

GO:

id name namespace
GO:0017001 antibiotic catabolic process biological_process
GO:0019541 propionate metabolic process biological_process
GO:0019543 propionate catabolic process biological_process
GO:0019626 short-chain fatty acid catabolic process biological_process
GO:0046459 short-chain fatty acid metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90428 True 286 lncRNA 0.40 3 28981122 28985576

Neighbor

gene id symbol gene type direction distance location
AMCG00014728 gsk3b,LOC107559500,LOC107721573,LOC107551994,LOC107715908 coding upstream 64488 28905901 ~ 28916634 (+)
AMCG00014727 gsk3b,LOC107703010 coding upstream 90154 28881917 ~ 28890968 (+)
AMCG00014725 lrrc58,LOC106574305 coding upstream 201832 28767435 ~ 28779290 (+)
AMCG00014726 LOC103028151 coding upstream 215032 28695811 ~ 28766090 (+)
AMCG00014723 NA coding upstream 371935 28591078 ~ 28609187 (+)
AMCG00014734 NA coding downstream 110553 29096129 ~ 29110638 (+)
AMCG00014733 NA coding downstream 135375 29120951 ~ 29129042 (+)
AMCG00014737 NA coding downstream 322364 29307940 ~ 29321592 (+)
AMCG00014741 LOC106586690,LOC106582147,LOC106575755 coding downstream 397912 29383488 ~ 29398221 (+)
AMCG00014740 LOC107557921 coding downstream 415056 29400632 ~ 29421379 (+)
G72341 NA non-coding upstream 59832 28918976 ~ 28921290 (+)
G72329 NA non-coding upstream 149147 28831756 ~ 28831975 (+)
G72273 NA non-coding upstream 402389 28526788 ~ 28578733 (+)
G72208 NA non-coding upstream 639405 28337291 ~ 28341717 (+)
G72173 NA non-coding upstream 680309 28297669 ~ 28300813 (+)
G72354 NA non-coding downstream 4031 28989607 ~ 28991299 (+)
G72409 NA non-coding downstream 151553 29137129 ~ 29137353 (+)
G72415 NA non-coding downstream 171449 29157025 ~ 29160425 (+)
G72426 NA non-coding downstream 206395 29191971 ~ 29192278 (+)
G72767 NA non-coding downstream 1851260 30836836 ~ 30837169 (+)
AMCG00014729 NA other upstream 143212 28797049 ~ 28837910 (+)
G72175 LOC102776245 other upstream 677049 28302373 ~ 28304073 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other upstream 1101322 27868703 ~ 27879800 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other upstream 1139251 27835503 ~ 27841871 (+)
AMCG00014687 NA other upstream 2069885 26904877 ~ 26911237 (+)
AMCG00014739 NA other downstream 262299 29247875 ~ 29256354 (+)
AMCG00014738 NA other downstream 282753 29268329 ~ 29279149 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other downstream 857891 29843467 ~ 29846586 (+)
G72605 NA other downstream 865874 29851450 ~ 29851821 (+)
AMCG00014777 NA other downstream 1778775 30764351 ~ 30812287 (+)

Expression


Co-expression Network