G72409


Basic Information

Item Value
gene id G72409
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 29137129 ~ 29137353 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU90496
GGGGGACCCTACCaacaggggtgtaaagtaacgaagtacaaatacttcggtcctgtacttaagtacgtttttcgagtatttgtacttcacttaagttttttttttttttttttttttggctacttttacttttactccactacatttatgaacaaaataatgtactttttactccactacatttcccacagacgactcgttactgttattataattgggagagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90496 True 225 lncRNA 0.34 1 29137129 29137353

Neighbor

gene id symbol gene type direction distance location
AMCG00014733 NA coding upstream 8087 29120951 ~ 29129042 (+)
AMCG00014734 NA coding upstream 26491 29096129 ~ 29110638 (+)
AMCG00014728 gsk3b,LOC107559500,LOC107721573,LOC107551994,LOC107715908 coding upstream 220495 28905901 ~ 28916634 (+)
AMCG00014727 gsk3b,LOC107703010 coding upstream 246161 28881917 ~ 28890968 (+)
AMCG00014725 lrrc58,LOC106574305 coding upstream 357839 28767435 ~ 28779290 (+)
AMCG00014737 NA coding downstream 170587 29307940 ~ 29321592 (+)
AMCG00014741 LOC106586690,LOC106582147,LOC106575755 coding downstream 246135 29383488 ~ 29398221 (+)
AMCG00014740 LOC107557921 coding downstream 263279 29400632 ~ 29421379 (+)
AMCG00014736 cryaa coding downstream 294168 29431521 ~ 29437107 (+)
AMCG00014743 NA coding downstream 403178 29540531 ~ 29558701 (+)
G72354 NA non-coding upstream 145830 28989607 ~ 28991299 (+)
G72353 NA non-coding upstream 151553 28981122 ~ 28985576 (+)
G72341 NA non-coding upstream 215839 28918976 ~ 28921290 (+)
G72329 NA non-coding upstream 305154 28831756 ~ 28831975 (+)
G72273 NA non-coding upstream 558396 28526788 ~ 28578733 (+)
G72415 NA non-coding downstream 19672 29157025 ~ 29160425 (+)
G72426 NA non-coding downstream 54618 29191971 ~ 29192278 (+)
G72767 NA non-coding downstream 1699483 30836836 ~ 30837169 (+)
G72768 NA non-coding downstream 1704207 30841560 ~ 30844670 (+)
G72769 NA non-coding downstream 1708809 30846162 ~ 30846421 (+)
AMCG00014729 NA other upstream 299219 28797049 ~ 28837910 (+)
G72175 LOC102776245 other upstream 833056 28302373 ~ 28304073 (+)
AMCG00014703 ndp,LOC107565935,LOC106586792 other upstream 1257329 27868703 ~ 27879800 (+)
AMCG00014704 fundc1,LOC102219358,LOC102292135,LOC102776203,LOC103475814,LOC106926458 other upstream 1295258 27835503 ~ 27841871 (+)
AMCG00014687 NA other upstream 2225892 26904877 ~ 26911237 (+)
AMCG00014739 NA other downstream 110522 29247875 ~ 29256354 (+)
AMCG00014738 NA other downstream 130976 29268329 ~ 29279149 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other downstream 706114 29843467 ~ 29846586 (+)
G72605 NA other downstream 714097 29851450 ~ 29851821 (+)
AMCG00014777 NA other downstream 1626998 30764351 ~ 30812287 (+)

Expression


Co-expression Network