G72646


Basic Information

Item Value
gene id G72646
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30054340 ~ 30055173 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU90789
ttatagtatcaccttatcacgaatcctggaatcttgtagaactcaatttctgtaataattggatgcagacaccaattccaaagatataaattgtcaaatttattcaaaaacaaagactaaatgtagcactacactaattatacaaaagggaaaaactaatttaaattcaactctagatcaacaaatcaaagacagttcacttccgtgaccaaatcaaagaccatgggatcgcatatgataacacacaaatcgttaaacaaaaaaggttataaacacattgactacaatactggttagtaagacgaaggtgagtctctcatttagtattgttagtcagacattaaataactatgcaggttagtatttatgtcaggtaacttctcgttatatatatatatatatcagtctcatttacgtttaggtgccgagaaagatcctatcattacttgttaccacaatttcccttaactgattattattcaatgattaatgattaaggataggcagtgCCATCTATAATCTGgtgtctattaacttgtgtcaatttcagactaaacagttaaacaggaatgagaagatatttctcggtgttgacagattttatttctaaaattatcaacaaaacagtttaatgcaacacacatttatatttaagaaaactaaatgatattacacattctagagttatgaatcacagattaacatttctaattgatttctcaaatgtcatgaatcatgaactccaaactgttaaacttatctgaacttcgttgcagagaggcctctctgtcttcgggctcagataacagcatgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90789 True 814 lncRNA 0.32 2 30054340 30055173

Neighbor

gene id symbol gene type direction distance location
AMCG00014758 NA coding downstream 103035 29950031 ~ 29951305 (-)
AMCG00014759 NA coding downstream 113457 29915255 ~ 29940883 (-)
AMCG00014755 NA coding downstream 201382 29843424 ~ 29852958 (-)
AMCG00014756 unc50,LOC107672653 coding downstream 213183 29835251 ~ 29841157 (-)
AMCG00014749 NA coding downstream 394955 29658273 ~ 29659385 (-)
AMCG00014762 rabl3,LOC107659889,LOC107595844 coding upstream 156965 30212138 ~ 30217061 (-)
AMCG00014763 NA coding upstream 565332 30620505 ~ 30627347 (-)
AMCG00014764 NA coding upstream 575263 30630436 ~ 30646339 (-)
AMCG00014765 NA coding upstream 613353 30668526 ~ 30689037 (-)
AMCG00014766 NA coding upstream 633869 30689042 ~ 30695325 (-)
G72642 NA non-coding downstream 71765 29968655 ~ 29982575 (-)
G72629 NA non-coding downstream 107279 29946717 ~ 29947061 (-)
G72581 NA non-coding downstream 311128 29739207 ~ 29743212 (-)
G72530 txndc9,LOC107568936,LOC107668903,LOC106586783 non-coding downstream 404698 29647588 ~ 29649642 (-)
G72535 NA non-coding downstream 492274 29560538 ~ 29562066 (-)
G72659 NA non-coding upstream 111544 30166717 ~ 30166926 (-)
G72680 NA non-coding upstream 155969 30211142 ~ 30211396 (-)
G72685 NA non-coding upstream 206164 30261337 ~ 30261604 (-)
G72693 NA non-coding upstream 339966 30395139 ~ 30395338 (-)
G72790 NA non-coding upstream 890917 30946090 ~ 30947343 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 656035 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 1721858 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 2684813 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 2749743 27285420 ~ 27304597 (-)
AMCG00014630 LOC107672672 other downstream 7809425 22225924 ~ 22244915 (-)
AMCG00014775 NA other upstream 786350 30841523 ~ 30846800 (-)
G73047 NA other upstream 2207994 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 2400133 32455306 ~ 32555945 (-)
G73127 NA other upstream 2542289 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 2739832 32795005 ~ 32806295 (-)

Expression


Co-expression Network