G72693


Basic Information

Item Value
gene id G72693
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30395139 ~ 30395338 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU90845
ctggaacagaggagactacgtggggacttgattcaagtcttcaaaatcatgaaaggcatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggtttcaaggcattcaaaatggaaaacaggagacacttcttcacacagagagtcgtcaccatctggaa

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0019538 protein metabolic process biological_process
GO:0043603 cellular amide metabolic process biological_process
GO:0043604 amide biosynthetic process biological_process
GO:1901564 organonitrogen compound metabolic process biological_process
GO:1901566 organonitrogen compound biosynthetic process biological_process
GO:0009058 biosynthetic process biological_process
GO:0009059 macromolecule biosynthetic process biological_process
GO:0043043 peptide biosynthetic process biological_process
GO:1901576 organic substance biosynthetic process biological_process
GO:0006412 translation biological_process
GO:0010467 gene expression biological_process
GO:0044237 cellular metabolic process biological_process
GO:0044238 primary metabolic process biological_process
GO:0044249 cellular biosynthetic process biological_process
GO:0044260 cellular macromolecule metabolic process biological_process
GO:0044267 cellular protein metabolic process biological_process
GO:0044271 cellular nitrogen compound biosynthetic process biological_process
GO:0071704 organic substance metabolic process biological_process
GO:0006518 peptide metabolic process biological_process
GO:0043170 macromolecule metabolic process biological_process
GO:0009987 cellular process biological_process
GO:0006807 nitrogen compound metabolic process biological_process
GO:0034641 cellular nitrogen compound metabolic process biological_process
GO:0034645 cellular macromolecule biosynthetic process biological_process
GO:0044391 ribosomal subunit cellular_component
GO:1990904 ribonucleoprotein complex cellular_component
GO:0022626 cytosolic ribosome cellular_component
GO:0022627 cytosolic small ribosomal subunit cellular_component
GO:0005840 ribosome cellular_component
GO:0015935 small ribosomal subunit cellular_component

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU90845 True 200 lncRNA 0.48 1 30395139 30395338

Neighbor

gene id symbol gene type direction distance location
AMCG00014762 rabl3,LOC107659889,LOC107595844 coding downstream 178078 30212138 ~ 30217061 (-)
AMCG00014758 NA coding downstream 443834 29950031 ~ 29951305 (-)
AMCG00014759 NA coding downstream 454256 29915255 ~ 29940883 (-)
AMCG00014755 NA coding downstream 542181 29843424 ~ 29852958 (-)
AMCG00014756 unc50,LOC107672653 coding downstream 553982 29835251 ~ 29841157 (-)
AMCG00014763 NA coding upstream 225167 30620505 ~ 30627347 (-)
AMCG00014764 NA coding upstream 235098 30630436 ~ 30646339 (-)
AMCG00014765 NA coding upstream 273188 30668526 ~ 30689037 (-)
AMCG00014766 NA coding upstream 293704 30689042 ~ 30695325 (-)
AMCG00014780 NA coding upstream 363819 30759157 ~ 30763061 (-)
G72685 NA non-coding downstream 133535 30261337 ~ 30261604 (-)
G72680 NA non-coding downstream 183743 30211142 ~ 30211396 (-)
G72659 NA non-coding downstream 228213 30166717 ~ 30166926 (-)
G72646 NA non-coding downstream 339966 30054340 ~ 30055173 (-)
G72642 NA non-coding downstream 412564 29968655 ~ 29982575 (-)
G72790 NA non-coding upstream 550752 30946090 ~ 30947343 (-)
G72791 NA non-coding upstream 554772 30950110 ~ 30951375 (-)
G72862 NA non-coding upstream 1066841 31462179 ~ 31463783 (-)
G72868 NA non-coding upstream 1071154 31466492 ~ 31467056 (-)
G72867 NA non-coding upstream 1085510 31480848 ~ 31485466 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 996834 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 2062657 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 3025612 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 3090542 27285420 ~ 27304597 (-)
AMCG00014630 LOC107672672 other downstream 8150224 22225924 ~ 22244915 (-)
AMCG00014775 NA other upstream 446185 30841523 ~ 30846800 (-)
G73047 NA other upstream 1867829 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 2059968 32455306 ~ 32555945 (-)
G73127 NA other upstream 2202124 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 2399667 32795005 ~ 32806295 (-)

Expression


Co-expression Network