G72768


Basic Information

Item Value
gene id G72768
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30841560 ~ 30844670 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU90940
cagACTTGCTTTGTACTAGTTTTATTATTGGAAACGAGGTTTTTACAGTGCAGTAGAGAGGTGATGTAGGGCTAACCCCTAAGCAGATGACACCAAGTGTTTTTGGTGAGCCCCCAACCATGTAATCTAGTAAAGCTCCTTCATGCAGGAATACAAAACAGAGATACAAGGTGACAAATTAGTTCACTGTGGCCACCAGTCTGCTGAGAAAGGTGCTCTTTCAAGAGAGGAGGTGAGTCCTGGTGAGAGTAGGCAGTAGGGAACAGTTAGCCTCAGTTAGCACAGTGATGTCATAACTGTATGCCCTTGGACAGAGACATTGGAATATAATGGTATGAAAACCAAAGCTTTGCTACCTGGAAGAAATGTAACTCTGTTTCAGCAGCATGGAGATGGGAGGGTGCATAAGTGCCTGTGAGGGGAGATTCAGTCAGCTTACTCTTGTGTTCACTGCTACACCTCGGGCTTCCTGACTCTGCATTTTAGTGGTGGCATCCCAGCATGTCAGCTATACTATGGGGTATTGGCTTGATTCTCCCAGTAGCCAGCAGCATTGGACTCCCGTAATCAAAGTACTCTGCTCCGACAAGGATCCGTACTCCCTCAGGCCCACACTTGGCCGCATCGATGTGTTTGTATGGCAGAGGCCATTCTTTACTCGCGGCCCGAGGACTTGCTGTCAGGTCCACGTCAATCATCTTGCTTCCTGGATGATGTGCACCACGTGTGTACCTGGACATACAAAAGCCGCATCCACATGTCCCTTCACGTGCAGCTCTTCTTCCACAGATTTGGGGTACCCTTCTACCAGGACGTAATACAATTTGTGGTCCCAGGAGAAGACTGCATCCACATCACTGTGCACTTCCTTCCACTGGCTGTCAATGGGCCATGCATGCCAGCCATCTCGTTTGGTGTCAAGACGTAGGAAATAGGCACCtcggaagatataatctcaagtgcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90940 True 964 lncRNA 0.49 4 30841560 30844670

Neighbor

gene id symbol gene type direction distance location
AMCG00014768 NA coding upstream 100416 30728363 ~ 30741144 (+)
AMCG00014774 NA coding upstream 131140 30700206 ~ 30710420 (+)
AMCG00014779 NA coding upstream 180965 30659601 ~ 30660595 (+)
AMCG00014772 NA coding upstream 231456 30594129 ~ 30610104 (+)
AMCG00014770 NA coding upstream 293038 30545213 ~ 30548522 (+)
AMCG00014771 NA coding downstream 2502 30847172 ~ 30851142 (+)
AMCG00014781 NA coding downstream 62499 30907169 ~ 30917566 (+)
AMCG00014784 NA coding downstream 178873 31023543 ~ 31027002 (+)
AMCG00014783 NA coding downstream 197221 31041891 ~ 31044741 (+)
AMCG00014787 vangl1,LOC106574540 coding downstream 396631 31241301 ~ 31264255 (+)
G72767 NA non-coding upstream 4391 30836836 ~ 30837169 (+)
G72426 NA non-coding upstream 1649282 29191971 ~ 29192278 (+)
G72415 NA non-coding upstream 1681135 29157025 ~ 29160425 (+)
G72409 NA non-coding upstream 1704207 29137129 ~ 29137353 (+)
G72354 NA non-coding upstream 1850261 28989607 ~ 28991299 (+)
G72769 NA non-coding downstream 1492 30846162 ~ 30846421 (+)
G72783 NA non-coding downstream 111235 30955905 ~ 30956284 (+)
G72789 NA non-coding downstream 158702 31003372 ~ 31003788 (+)
G72815 LOC103352915,LOC107742653,LOC105893249,LOC107739823,LOC107667646,LOC107552369,LOC107700101,LOC108434690 non-coding downstream 433417 31278087 ~ 31287434 (+)
G72861 NA non-coding downstream 617476 31462146 ~ 31463811 (+)
AMCG00014777 NA other upstream 29273 30764351 ~ 30812287 (+)
G72605 NA other upstream 989739 29851450 ~ 29851821 (+)
AMCG00014757 LOC105927538,LOC107688735,LOC105016589,LOC104946938,LOC107716767,LOC107676512,LOC107099897,LOC103140352 other upstream 994974 29843467 ~ 29846586 (+)
AMCG00014738 NA other upstream 1562411 29268329 ~ 29279149 (+)
AMCG00014739 NA other upstream 1585206 29247875 ~ 29256354 (+)
G72785 fam160a2 other downstream 133546 30978216 ~ 30978825 (+)
G72786 NA other downstream 134900 30979570 ~ 30980252 (+)
G72787 NA other downstream 145393 30990063 ~ 30996363 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other downstream 298753 31143423 ~ 31147877 (+)
AMCG00014793 NA other downstream 668138 31512808 ~ 31523187 (+)

Expression


Co-expression Network