G72791


Basic Information

Item Value
gene id G72791
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30950110 ~ 30951375 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU90971
gtgtgtgtgtgtgtgagaccgAAAGCTTGCGttacttgtttttcttgaatGCTAAAATGTTCACTGACAGTGGGGGTAAGGGAAGGTTTTTCGAAAATGTCCCTGCGATTTATTGGGAAGAGGCtgaccaatgtttttttttgtttgttttttctagatcttgattttatttttcttgcttgtGTTTCTTCAAGAATGTCTGCCTTACGTTAATCTCTACTGCCTATCCCTGTCTTTAGTTAATGAGCCACAACCTGCAGAGCGAAATGCTTCCATTGGGGTGGTGGGGCAGGGGGTCAAGTCCAAAGCGACAATGAAGAGAATTCAAGCGGTTTCTTCTGTGTATAGAATAGGGAGGCCTGTACTGCTGTGGCCACAGATATTCAcactcttcatttgaaacagtgtGATTTAGTGATTGATTTAGTtaattcaatattgtttttaccTGTTCTAATCAATGCTATCTGTTGAGTTTTTTGAACACCGATCCCGACTAGAGAAAACTGTATAGATTTCAGGTGATCGAGGCGGAgcctgtaaacatttttaacttcTGACATCCCATTAATCTCTGAAGATTTCCGTTGTGGCAAGTCTGACGTTTAAGCTCCCCCTGTCCTATCTAAGGTCAGTGAAGAGGACAGCTCTCTCTAGGCCGAATCAGAGTTCCACTACCTCTCCAAAGACAACATTGATCAGTCCGTCTCACAAGCAATATTTATTCAACCAAATGAATTGCCCAATAACACGGTTTCAGAAGTAGGGTGGACTACCACTGTACATCCCAGATAGAGATGGTTCACTTGAAGGTGAACTTCATATAAAagttttcttttataatttACTTCCTCATTGTTTGTTTCCTTAAGTCCCTCCGTCCAAGTGACACATTTTGTCCCAAAGGCAAATTGTGCccaaaaatgtgtgattttgatAGTCTGCTAGCACTAACAATAACAGACattcttccttcctccagctatCATAGGTAGGCTTTCAAGTTTATAATCTAAAGCTGTGCCGTAATGGTTAGTTCCCCCACATGGAGAATTGTAATGATAATTCTCAAACTCCAACCAACACTATCTTTCCCCCAACAGCCGTGCTTTTCTTTATACTAAGCAACTGCTGCCCTTTTCCATTACTGTTAGTACTGAGTTAAGTAATTGCCCCAGGCTAATATCGAGCTCTCGGGTGCTAGTCTTTCAGGTGAGGCCATTTAGCACTTTAAATAAATTTTGTTCCCAGTGGGTTGAGCTTCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90971 True 1266 lncRNA 0.41 1 30950110 30951375

Neighbor

gene id symbol gene type direction distance location
AMCG00014782 NA coding downstream 24903 30922355 ~ 30925207 (-)
AMCG00014780 NA coding downstream 187049 30759157 ~ 30763061 (-)
AMCG00014766 NA coding downstream 254785 30689042 ~ 30695325 (-)
AMCG00014765 NA coding downstream 261073 30668526 ~ 30689037 (-)
AMCG00014764 NA coding downstream 303771 30630436 ~ 30646339 (-)
AMCG00014785 NA coding upstream 1096 30952471 ~ 30979877 (-)
AMCG00014791 LOC106574540 coding upstream 310341 31261716 ~ 31279130 (-)
AMCG00014790 casq1,LOC107742653,LOC107739823,LOC106575318,LOC107552369 coding upstream 327939 31279314 ~ 31292735 (-)
AMCG00014789 NA coding upstream 385738 31337113 ~ 31345430 (-)
AMCG00014796 NA coding upstream 518184 31469559 ~ 31471622 (-)
G72790 NA non-coding downstream 2767 30946090 ~ 30947343 (-)
G72693 NA non-coding downstream 554772 30395139 ~ 30395338 (-)
G72685 NA non-coding downstream 688506 30261337 ~ 30261604 (-)
G72680 NA non-coding downstream 738714 30211142 ~ 30211396 (-)
G72659 NA non-coding downstream 783184 30166717 ~ 30166926 (-)
G72862 NA non-coding upstream 510804 31462179 ~ 31463783 (-)
G72868 NA non-coding upstream 515117 31466492 ~ 31467056 (-)
G72867 NA non-coding upstream 529473 31480848 ~ 31485466 (-)
G72874 NA non-coding upstream 564055 31515430 ~ 31519932 (-)
G72919 NA non-coding upstream 746280 31697655 ~ 31698012 (-)
AMCG00014775 NA other downstream 103310 30841523 ~ 30846800 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 1551805 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 2617628 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 3580583 27335695 ~ 27369527 (-)
AMCG00014693 NA other downstream 3645513 27285420 ~ 27304597 (-)
G73047 NA other upstream 1311792 32263167 ~ 32263427 (-)
AMCG00014816 NA other upstream 1503931 32455306 ~ 32555945 (-)
G73127 NA other upstream 1646087 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 1843630 32795005 ~ 32806295 (-)
AMCG00014825 NA other upstream 2118874 33070249 ~ 33119328 (-)

Expression


Co-expression Network