G72926


Basic Information

Item Value
gene id G72926
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 31745523 ~ 31746900 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU91145
GTTTAATAATCAACCTCATCTAACTTGTCTTTCCCCACAGCGGAAAGTCTTTCTGACCTCAAAGGCTCTAACTATGCTGGACAGGTTGATCAAACATAATCTGAATGAGAAGGAGGAGCTGTTGACTTCTCTGGAGGAGATGCAGAAGGAAAATGAGGCAATGGAAGCTGAACTAAAAACTGCCCGAAGGAAGTTGTACGTCTCCTTAAAAAAGATGCACGGTGGCCACAGCAGTGGCAGCTGATTGGACTTTGTCTGGACCGGGAGAACGtcaattttgtattatgtttttttttttttttctcatttgatacattcatttgagactataactcCAATAATTTAGTCATATACAACTAACCACGACAGTTGACTGCGGCAactgtaggctacttaaaatgtgttcaaaatTAAAGCTTGTATGTCATGCAAACTGTGGGTCCAATTTCTGATGTTATTCTATAAAAAACATCTGAACATCaggaatcaaacccacaatGCTGGGCTCGCATGACATACAAGCTTTAATTAGAAACCTGGTTTAAGTAGCCTATAGCTGCCGCAGTTaactgtcctgattagttgtacatgactgaattattggagttATAGTCTCACATGAATTGAtgaattaaggaaaaaaaaaaaaaattaataaataataaaaagtgtgtatatattatatttatacctATACATAGGTATATGTGTTCTATCGGTCTACAATAAGTAATTGCACTCAttgttacaaatgctcaagcgGAGAAAATATGAGGGGGGTGAACTGTTGTGGGGACAAATTGTTATAGGAGAGAATTGTGGTGTTGGGGAATTGCTACAG

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU91145 True 841 lncRNA 0.37 3 31745523 31746900

Neighbor

gene id symbol gene type direction distance location
AMCG00014798 NA coding upstream 4173 31727286 ~ 31741350 (+)
AMCG00014801 NA coding upstream 36004 31707248 ~ 31709519 (+)
AMCG00014800 NA coding upstream 49350 31681531 ~ 31696173 (+)
AMCG00014792 NA coding upstream 414848 31312973 ~ 31330675 (+)
AMCG00014788 poglut1 coding upstream 437261 31297750 ~ 31308262 (+)
AMCG00014804 NA coding downstream 6376 31753276 ~ 31763835 (+)
AMCG00014805 NA coding downstream 17280 31764180 ~ 31765038 (+)
AMCG00014803 NA coding downstream 19164 31766064 ~ 31769661 (+)
AMCG00014802 NA coding downstream 56030 31802930 ~ 31825314 (+)
AMCG00014807 NA coding downstream 118231 31865131 ~ 31890448 (+)
G72912 NA non-coding upstream 41950 31703146 ~ 31703573 (+)
G72911 NA non-coding upstream 43088 31702162 ~ 31702435 (+)
G72875 LOC103376870 non-coding upstream 153418 31524315 ~ 31592105 (+)
G72861 NA non-coding upstream 281712 31462146 ~ 31463811 (+)
G72815 LOC103352915,LOC107742653,LOC105893249,LOC107739823,LOC107667646,LOC107552369,LOC107700101,LOC108434690 non-coding upstream 458089 31278087 ~ 31287434 (+)
G73017 NA non-coding downstream 219022 31965922 ~ 31966189 (+)
G73018 NA non-coding downstream 220456 31967356 ~ 31969205 (+)
G73019 NA non-coding downstream 225085 31971985 ~ 31995538 (+)
G73045 NA non-coding downstream 509109 32256009 ~ 32256776 (+)
G73105 NA non-coding downstream 811381 32558281 ~ 32564339 (+)
AMCG00014793 NA other upstream 222336 31512808 ~ 31523187 (+)
AMCG00014786 nhlh2,LOC106574539,LOC107739819,LOC105019883 other upstream 597646 31143423 ~ 31147877 (+)
G72787 NA other upstream 749160 30990063 ~ 30996363 (+)
G72786 NA other upstream 765271 30979570 ~ 30980252 (+)
G72785 fam160a2 other upstream 766698 30978216 ~ 30978825 (+)
AMCG00014799 NA other downstream 44001 31790901 ~ 31798463 (+)
AMCG00014811 NA other downstream 192653 31939553 ~ 31962971 (+)
G73103 NA other downstream 795610 32542510 ~ 32561489 (+)
G73244 NA other downstream 1617855 33364755 ~ 33366100 (+)
G73292 LOC100846954 other downstream 2492034 34238934 ~ 34239400 (+)

Expression


Co-expression Network