G73066


Basic Information

Item Value
gene id G73066
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 32357702 ~ 32362393 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU91304
CTGAGCGACTTGCGAGTTTAGCGAGCGGGCAGAGTGAACGTAGGGTTACACAACACCAGCCCCGACCAGGCAAATGGATATGATCAGCACTCCAATAACACAAGTAAGTCGGTTCGAACTCCTCATCCTCTCTCGCAGCCTGACAGCAAACCGCTGACCAGGCGGACAGCCGCAGACTGGAAATGGAAGACCTCAGATATAGCTGAACGTGGCGAATACCAGGGGAGAGGGGATACACCAAGTTCCAAATAAAGCGG

Function

GO:

id name namespace
GO:0050879 multicellular organismal movement biological_process
GO:0050881 musculoskeletal movement biological_process
GO:0003009 skeletal muscle contraction biological_process
GO:0003010 voluntary skeletal muscle contraction biological_process
GO:0031444 slow-twitch skeletal muscle fiber contraction biological_process
GO:0014721 twitch skeletal muscle contraction biological_process
GO:0005248 voltage-gated sodium channel activity molecular_function
GO:0005272 sodium channel activity molecular_function
GO:0015081 sodium ion transmembrane transporter activity molecular_function

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU91304 True 257 lncRNA 0.54 3 32357702 32362393

Neighbor

gene id symbol gene type direction distance location
AMCG00014814 NA coding downstream 34943 32321974 ~ 32322759 (-)
AMCG00014813 NA coding downstream 71766 32270685 ~ 32285936 (-)
AMCG00014809 NA coding downstream 388479 31967444 ~ 31969223 (-)
AMCG00014806 NA coding downstream 567965 31769573 ~ 31789737 (-)
AMCG00014797 NA coding downstream 650180 31700627 ~ 31707522 (-)
AMCG00014820 NA coding upstream 266439 32628832 ~ 32641932 (-)
AMCG00014819 NA coding upstream 285141 32647534 ~ 32648995 (-)
AMCG00014818 NA coding upstream 287783 32650176 ~ 32653420 (-)
AMCG00014823 slc10a2 coding upstream 429488 32791881 ~ 32793425 (-)
AMCG00014826 NA coding upstream 765285 33127678 ~ 33434382 (-)
G73049 NA non-coding downstream 92278 32265132 ~ 32265424 (-)
G73046 NA non-coding downstream 100927 32256155 ~ 32256775 (-)
G73005 NA non-coding downstream 458757 31896940 ~ 31898945 (-)
G72919 NA non-coding downstream 659690 31697655 ~ 31698012 (-)
G72874 NA non-coding downstream 837770 31515430 ~ 31519932 (-)
G73082 NA non-coding upstream 68204 32430597 ~ 32430951 (-)
G73106 NA non-coding upstream 88029 32450422 ~ 32466416 (-)
G73112 NA non-coding upstream 160845 32523238 ~ 32523802 (-)
G73117 NA non-coding upstream 207278 32569671 ~ 32574686 (-)
G73132 NA non-coding upstream 266136 32628529 ~ 32630521 (-)
G73047 NA other downstream 94275 32263167 ~ 32263427 (-)
AMCG00014775 NA other downstream 1510902 30841523 ~ 30846800 (-)
G72477 LOC106598269,LOC101158751,LOC106586690,LOC103361283 other downstream 2959397 29389290 ~ 29398305 (-)
G72236 rpl8,LOC107595836,LOC107748161 other downstream 4025220 28329739 ~ 28332482 (-)
AMCG00014692 LOC107756725 other downstream 4988175 27335695 ~ 27369527 (-)
AMCG00014816 NA other upstream 92913 32455306 ~ 32555945 (-)
G73127 NA other upstream 235069 32597462 ~ 32619149 (-)
AMCG00014824 NA other upstream 432612 32795005 ~ 32806295 (-)
AMCG00014825 NA other upstream 707856 33070249 ~ 33119328 (-)
G73328 LOC101154678 other upstream 2407190 34769583 ~ 34769979 (-)

Expression


Co-expression Network