G73327 (LOC101154678)


Basic Information

Item Value
gene id G73327
gene name LOC101154678
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 34769583 ~ 34769958 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU91606
ccacagcatgatgctgccaccaccatgcttcattgtagggatggtattggccaggtgatgagcggtgcctgatttcctccagacatgagttcaatctttgtttcatcagaccagagaattttgtttctcatggtctgagagtccttcaggtgccttttggcaaactccaggcgggctgtcatgtgccttttactgaggagtggcttccgtctggccactctaccatacaggcctgattggtggagtgctgcagagatggttgttcttctggaaggttctcctctctccacagagacatgctggagctctgtcaaAATGACCATCGGGTttttggtcacctccctgactaaggcccttctcccccaatcgctcagtt

Function

NR:

description
transposase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91606 True 376 lncRNA 0.51 1 34769583 34769958

Neighbor

gene id symbol gene type direction distance location
AMCG00014827 NA coding upstream 991335 33697523 ~ 33778248 (+)
AMCG00014822 NA coding upstream 2000604 32758965 ~ 32768979 (+)
AMCG00014821 LOC107738524 coding upstream 2013446 32734868 ~ 32756137 (+)
AMCG00014817 taf6 coding upstream 2106429 32653743 ~ 32663154 (+)
AMCG00014815 gja8,LOC107746070,LOC107566528,LOC107566539,LOC107603011,LOC107746288,LOC107676899 coding upstream 2372075 32396687 ~ 32397508 (+)
AMCG00014833 NA coding downstream 257899 35027857 ~ 35320982 (+)
AMCG00014835 NA coding downstream 601026 35370984 ~ 35382903 (+)
AMCG00014834 NA coding downstream 694043 35464001 ~ 35474369 (+)
AMCG00014837 NA coding downstream 781199 35551157 ~ 35551807 (+)
AMCG00014848 tmprss3,LOC107748899 coding downstream 1525758 36295716 ~ 36297723 (+)
G73326 NA non-coding upstream 15812 34753537 ~ 34753771 (+)
G73321 NA non-coding upstream 159171 34610180 ~ 34610412 (+)
G73304 NA non-coding upstream 319199 34450155 ~ 34450384 (+)
G73297 NA non-coding upstream 406635 34362707 ~ 34362948 (+)
G73295 NA non-coding upstream 476040 34293337 ~ 34293543 (+)
G73354 NA non-coding downstream 308701 35078659 ~ 35078896 (+)
G73356 NA non-coding downstream 398991 35168949 ~ 35169206 (+)
G73374 NA non-coding downstream 483911 35253869 ~ 35256115 (+)
G73380 NA non-coding downstream 497686 35267644 ~ 35268081 (+)
G73427 NA non-coding downstream 702102 35472060 ~ 35476459 (+)
G73292 LOC100846954 other upstream 530183 34238934 ~ 34239400 (+)
G73244 NA other upstream 1403483 33364755 ~ 33366100 (+)
G73103 NA other upstream 2208094 32542510 ~ 32561489 (+)
AMCG00014811 NA other upstream 2806612 31939553 ~ 31962971 (+)
AMCG00014799 NA other upstream 2971120 31790901 ~ 31798463 (+)
G73329 NA other downstream 10164 34780122 ~ 34780590 (+)
G73343 NA other downstream 172053 34942011 ~ 34960447 (+)
AMCG00014836 NA other downstream 620676 35390634 ~ 35412587 (+)
G73850 NA other downstream 2748150 37518108 ~ 37518406 (+)
G74114 NA other downstream 3662416 38432374 ~ 38432861 (+)

Expression


Co-expression Network