G73330


Basic Information

Item Value
gene id G73330
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 34780122 ~ 34780590 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU91609
ccacaacactttcacccagttctcctctgaatcattcagatgttggcaaacatgtgctttcttgagcagggggaccttgcgtcgctgcaggatttcagtccttcacggcatagtgtgttaccaattgttttcttggtgactatggtcccagctgccttgagatcattaacaagatcctcccgtgtagttctgggctgattcctcaccgttctcatgatcattgaaactccacgaggtgagatcttgcatggagccccagatcgagggagactgacagttattttgtgtttcttccatttggtcttgtagcccattagGTCTAcagtcttgtccctgacatccttggacagctctttggtcttggccatggtggagagtttggaatctgattgattgattgcttctgtggacaggtgtcttttatacaggtaacgagctgagattaggagcactccctttaagagagtct

Function

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
TU91609 True 469 lncRNA 0.47 1 34780122 34780590

Neighbor

gene id symbol gene type direction distance location
AMCG00014828 NA coding downstream 214920 34564486 ~ 34565202 (-)
AMCG00014826 NA coding downstream 1345740 33127678 ~ 33434382 (-)
AMCG00014823 slc10a2 coding downstream 1986697 32791881 ~ 32793425 (-)
AMCG00014818 NA coding downstream 2126702 32650176 ~ 32653420 (-)
AMCG00014819 NA coding downstream 2131127 32647534 ~ 32648995 (-)
AMCG00014829 efnb2a coding upstream 130003 34910593 ~ 34931646 (-)
AMCG00014830 arglu1,LOC106586866 coding upstream 162385 34942975 ~ 34960249 (-)
AMCG00014832 NA coding upstream 392279 35172869 ~ 35180639 (-)
AMCG00014838 LOC106600244 coding upstream 854397 35634987 ~ 35688097 (-)
AMCG00014841 NA coding upstream 961944 35742534 ~ 35767390 (-)
G73319 NA non-coding downstream 176966 34569550 ~ 34603156 (-)
G73309 NA non-coding downstream 316797 34462489 ~ 34463325 (-)
G73298 NA non-coding downstream 417108 34362758 ~ 34363014 (-)
G73296 NA non-coding downstream 486582 34293273 ~ 34293540 (-)
G73291 NA non-coding downstream 583876 34195967 ~ 34196246 (-)
G73335 NA non-coding upstream 57043 34837633 ~ 34837943 (-)
G73336 NA non-coding upstream 84935 34865525 ~ 34865745 (-)
G73365 NA non-coding upstream 442938 35223528 ~ 35223860 (-)
G73366 NA non-coding upstream 453130 35233720 ~ 35234115 (-)
G73373 NA non-coding upstream 471304 35251894 ~ 35252734 (-)
G73328 LOC101154678 other downstream 10143 34769583 ~ 34769979 (-)
AMCG00014825 NA other downstream 1660794 33070249 ~ 33119328 (-)
AMCG00014824 NA other downstream 1973827 32795005 ~ 32806295 (-)
G73127 NA other downstream 2160973 32597462 ~ 32619149 (-)
AMCG00014816 NA other downstream 2224177 32455306 ~ 32555945 (-)
AMCG00014839 tmem50b,LOC101064157,LOC101067980 other upstream 800036 35580626 ~ 35608677 (-)
G73604 pdxk,LOC106574311,LOC105019670,LOC108428208,LOC107676865 other upstream 1320768 36101358 ~ 36182351 (-)
G73612 NA other upstream 1473184 36253774 ~ 36254187 (-)
AMCG00014845 NA other upstream 1592561 36373151 ~ 36393493 (-)
G73833 NA other upstream 2544430 37325020 ~ 37325307 (-)

Expression


Co-expression Network