G73471


Basic Information

Item Value
gene id G73471
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 35740535 ~ 35742847 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU91776
tattttaaactgtataatgcgtacatatttaaattttaacaattaaacaatacaatctgAGGTGTATTAATCAAATGGAATCATTTAAAGAACAATGTGAAAATATggtattttttcaaatgaacaatgaaaatgtattatatgtcATTATATTTAAGTGAACAAGTCAAACAGgcattcattttttccagaccCCAGCCAACCAccttatttaataattaaattaatacactaTTTACAATGTAgccttaaacaaaataaactactcaaacacacacaaaaaaaaatatttatgcaagataaataatattacTGGTCACATTTTTTACTCTTTTATACTTTGCAGTCTCTTCACAGATCAATCTGAGATTTGTTACAGTACCGAACCCCCAAGTAGGTTTCCAATGATTAAAGAGAAGAAGTTTCCTGGGCTTACTAAAACTTGACATAAGAATCATTCAAAACTAtggttttctatattttttaattgcatgaaaTATATCCACAGAAGGATCATGTAGCCAAATGACTGTCTGTTGGTATATGTAAGTTTCAAAGCCCAAACAggtttctatattttttttggtCAGCTGGTCCTAAAAACTGGCCAATAAATTTAGCCAATTGTGGCACATCAAGAAGAAACAGATAAGGAGAGGGGAGCTCATGGAAGAAACAAAAGTAGGGGAAAAGGCTAAATTGGCCAAGAATTAGGAAAAtgtgcaattcaaaataataatatattgtaaaactgttggaaaataaaaactttttcaaGAGAAAAGTACTAAATCAGAAAACAACCATGAAAGACACATGTAACACTTGACAGGGTCTTGAATCTCATGGGCAGATTGGTATGTGTAGAATAAGACCCCTGCTCCTTGAGTCATGTATTCTGTTTTCTGGTTAATACagttattatataatttgtattattatataataatcaaaagAGTATTTGAATGAGTAATTCCCACCTGTGTGTGTACATTAACCCGTTAAGACATCCATACAGGAATAAGCATTAATTAAGGACAGACTAAACAGTTTGCTAACATTCTTTGGCAGCAATACATACTGCTGCAGAAGAAAATGGGAAAGCAGTTCAATGAAGGTATCAacaagtataaatatttaagagTTAAGTTATAATATTGAATTTGATTGGAGACAATATTCAAATAAGAAAGTATCACATGCTGACATTTCTTTCTTACTTGAATTATGTCAATTATTagaataaattagaataatacattaaataattgaatagcAAACAGTTACCTACATATCAATATTCAAGATCAATGATACCAATGAATGGGGAACTAAAAATGGCATTTATACAACTACTACAAAGTAGCACAATGTGTATGGGTTATGAAACCACTGTTTCAATTAGTCCAAAACTATAGCTATTCCCAAAGCATTGCAAACTAAACTTAAGTTTTATACACTGTATTTGGGTGATTTGGtacttaattttttattttttttatttccatagaGCAGGCATGGGAAAGCTCAGCATGAGCTAGTTATTATTAAAGGGGAGTGTATTGAATGCTTTTTCCAGATGTACATTTTTGATGCATGAAAAAAGATGACTGCCTGTGCCAGGAAGAGGGGGTGGCACAGAATGGACAACTGGTTTACTGAGACTCATCCTAGTCCTCTGCCGAACCTGGGTTACCTTTTGAAAGGTGGGATAAGCCAAACCAACCATTTTCAGCaatatgaaaaggaaaagcaaaacaaacaaacaaaaaaacacaagcttGATTGATGGCTGGGGTTGTGCTGCGTTTACCTTGTTAATAAGAGACAGATTCTCCACCTTTATGGACAGTCTGCTGAATAGGCCTACAGGGTCTCCGTGTTTCTTCCCAGTCAAGTGCAACCATATCCAAGtctagtgtgtgagtgtgaaggAGCAGGAAGTCTGTTGTCATGTTACATTGACCTCCAGTACATGGTCATCCTTGCTGGGTACCACCAGGACCTGCTCGCCAGAGCTGCTGTTGAAGATCTGGCAAGGGCTGAAGGGCTCGAGGCGTGGGATGGGCAAGCCCTTATGTTCACTGCCCGTCGAGTGCGTGCTGGTGCGACTCCGAATGCTACTGTTGTCTGCTTGTTCATCCAGTGCCTTGTCAATAGACAGACTGTCGTTCTCAATCCAGCTGTCTGTAGCATGAGAACACACAGTAAGAACTActactaaaaactaaaacaatcttGGTCCCACTTTAAAAGAAGTTTAaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91776 True 2265 lncRNA 0.35 2 35740535 35742847

Neighbor

gene id symbol gene type direction distance location
AMCG00014837 NA coding upstream 188728 35551157 ~ 35551807 (+)
AMCG00014834 NA coding upstream 266166 35464001 ~ 35474369 (+)
AMCG00014835 NA coding upstream 357632 35370984 ~ 35382903 (+)
AMCG00014833 NA coding upstream 419553 35027857 ~ 35320982 (+)
AMCG00014831 NA coding upstream 808675 34691085 ~ 34931860 (+)
AMCG00014848 tmprss3,LOC107748899 coding downstream 552869 36295716 ~ 36297723 (+)
AMCG00014850 NA coding downstream 874818 36617665 ~ 36733253 (+)
AMCG00014852 NA coding downstream 1170553 36913400 ~ 36914503 (+)
AMCG00014853 cyh2,cyth4,LOC107558519,LOC107555099 coding downstream 1257783 37000630 ~ 37030062 (+)
AMCG00014862 NA coding downstream 1953813 37696660 ~ 37706352 (+)
G73463 NA non-coding upstream 56377 35674973 ~ 35684158 (+)
G73462 NA non-coding upstream 68485 35671778 ~ 35672050 (+)
G73431 NA non-coding upstream 238101 35497197 ~ 35502434 (+)
G73427 NA non-coding upstream 264076 35472060 ~ 35476459 (+)
G73380 NA non-coding upstream 472454 35267644 ~ 35268081 (+)
G73525 NA non-coding downstream 354433 36097280 ~ 36097948 (+)
G73608 NA non-coding downstream 451203 36194050 ~ 36194315 (+)
G73616 NA non-coding downstream 515381 36258228 ~ 36258468 (+)
G73619 LOC107575789 non-coding downstream 561737 36304584 ~ 36349056 (+)
G73638 NA non-coding downstream 733761 36476608 ~ 36477950 (+)
AMCG00014836 NA other upstream 327948 35390634 ~ 35412587 (+)
G73343 NA other upstream 780088 34942011 ~ 34960447 (+)
G73329 NA other upstream 959945 34780122 ~ 34780590 (+)
G73292 LOC100846954 other upstream 1501135 34238934 ~ 34239400 (+)
G73244 NA other upstream 2374435 33364755 ~ 33366100 (+)
G73850 NA other downstream 1775261 37518108 ~ 37518406 (+)
G74114 NA other downstream 2689527 38432374 ~ 38432861 (+)
G74227 NA other downstream 3067846 38810693 ~ 38811128 (+)
G74348 NA other downstream 3593421 39336268 ~ 39475819 (+)
AMCG00014909 ankrd54 other downstream 3841191 39584038 ~ 39588507 (+)

Expression


Co-expression Network