G73619 (LOC107575789)


Basic Information

Item Value
gene id G73619
gene name LOC107575789
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 36304584 ~ 36349056 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU91960
gtagtgtgttaccaattgttttcttggtgactatggtcccagctgccttgagatcattaacaagatcctcccgtgtagttctgggctgattcctcaccgttctcatgatcattgaaactccacgaggtgagatcttgcatggagccccagactgacagttattttgtgtttcttccatttgcgaataatagaataaactgttgtcaccttctcaccaagctgcttggcgttggtcttgtagcccattccagccttgtgtaggtctacaatcttgtccctgacatccttggacagctctttggtcttggccatggtggagagtttggaatctgattgattgattgcttctgtggacaggtgtctttcatacaggtaacgagctgagattagaagcactccctttaagagagtgctcctaatctcagctcgttacctgtataaaagacacctgggagccagaaatcttgctgattgataggggatcaaatacttatttccctcattaacatgcaagtcaatgtat
>TU91961
gtagtgtgttaccaattgttttcttggtgactatggtcccagctgccttgagatcattaacaagatcctcccgtgtagttctgggctgattcctcaccgttctcatgatcattgaaactccacgaggtgagatcttgcatggagccccagaccgagggagactgacagttattttgtgtttcttccatttgcgaataatcgcaccaactttctcaccaagctgcttggcgttggtcttgtagcccattccagccttgtgtaggtctacaatcttgtccctgacatccttggacagctctttggtcttggccatggtggagagtttggaatctgattgattgattgcttctgtggacaggtgtctttcatacaggtaacgagctgagattagaagcactccctttaagagagtgctcctaatctcagctcgttacctgtataaaagacacctgggagccagaaatcttgctgattgataggggatcaaatacttatttccctcattaacatgcaagtcaatgtat

Function

NR:

description
biliverdin reductase A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91960 False 523 lncRNA 0.44 2 36304584 36349056
TU91961 True 524 lncRNA 0.45 2 36304584 36349056

Neighbor

gene id symbol gene type direction distance location
AMCG00014848 tmprss3,LOC107748899 coding upstream 6861 36295716 ~ 36297723 (+)
AMCG00014837 NA coding upstream 752777 35551157 ~ 35551807 (+)
AMCG00014834 NA coding upstream 830215 35464001 ~ 35474369 (+)
AMCG00014835 NA coding upstream 921681 35370984 ~ 35382903 (+)
AMCG00014833 NA coding upstream 983602 35027857 ~ 35320982 (+)
AMCG00014850 NA coding downstream 268609 36617665 ~ 36733253 (+)
AMCG00014852 NA coding downstream 564344 36913400 ~ 36914503 (+)
AMCG00014853 cyh2,cyth4,LOC107558519,LOC107555099 coding downstream 651574 37000630 ~ 37030062 (+)
AMCG00014862 NA coding downstream 1347604 37696660 ~ 37706352 (+)
AMCG00014864 NA coding downstream 1404739 37753795 ~ 37754523 (+)
G73616 NA non-coding upstream 46116 36258228 ~ 36258468 (+)
G73608 NA non-coding upstream 110269 36194050 ~ 36194315 (+)
G73525 NA non-coding upstream 206636 36097280 ~ 36097948 (+)
G73471 NA non-coding upstream 561737 35740535 ~ 35742847 (+)
G73463 NA non-coding upstream 620426 35674973 ~ 35684158 (+)
G73638 NA non-coding downstream 127552 36476608 ~ 36477950 (+)
G73641 NA non-coding downstream 141127 36490183 ~ 36500130 (+)
G73689 NA non-coding downstream 305899 36654955 ~ 36689065 (+)
G73739 NA non-coding downstream 423429 36772485 ~ 36772741 (+)
G73748 NA non-coding downstream 489773 36838829 ~ 36941821 (+)
AMCG00014836 NA other upstream 891997 35390634 ~ 35412587 (+)
G73343 NA other upstream 1344137 34942011 ~ 34960447 (+)
G73329 NA other upstream 1523994 34780122 ~ 34780590 (+)
G73292 LOC100846954 other upstream 2065184 34238934 ~ 34239400 (+)
G73244 NA other upstream 2938484 33364755 ~ 33366100 (+)
G73850 NA other downstream 1169052 37518108 ~ 37518406 (+)
G74114 NA other downstream 2083318 38432374 ~ 38432861 (+)
G74227 NA other downstream 2461637 38810693 ~ 38811128 (+)
G74348 NA other downstream 2987212 39336268 ~ 39475819 (+)
AMCG00014909 ankrd54 other downstream 3234982 39584038 ~ 39588507 (+)

Expression


Co-expression Network