G73791


Basic Information

Item Value
gene id G73791
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 37160988 ~ 37163326 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU92162
GGGAAGAGGAAGTGGGGTGACTGACTAACACTATGGACAGTGTAGGAAGTCAGGGAAAAAACAGACTTGGTTGACAAAAGAAAGATCTGATATGAACCAATGGGACATACTGGTCCCTGTCAAGCGGTGATTGGATTGAATGGGGGGTTGTCCTGCCCCCTGCACTATAATTGCCCTCTGAGGAGATCGGAATCGGAAACCGGAAACTGGAACGACGACCGACCGACCGAACGAGGAAGGGAGGCGCATCGCAGCACGGAGCGGACATTGCAGGTTCAGGTGTGGATTGGCTTATGGCGATCGACTGGAGAGACGGGTGTGCAAGCGAGAAACAAAGCTGACTGGGGACGAGAGAGACCGTAGCAGAGTGTAGCCACCGACGAGGTGACAATCTACAGCAGGAAGGGCAAGCCGGCGAGGAGTGTGAAGCGAGCAACTTATAATGACGAGAAACTGGGCCTTCTAAGGCCATATTCTATTCAGTAGGTGtctgtacattatatttcacCCTCCTTTGCGGGGTGCACAATCCTTAGTTTTTTCGGGAATGACATATGTATATACCCCGTAGGCAGGAATGgcaggatttttattttgaaacgaCAAGAGCCTTCTAGCTGTATTGCCTACCGGAAGTAGAACGCTTATATTTGCTTAATATTGCTAGCTTCACATTTCTAAGCCGGCGAGCCCTTCCACTAAGTTAAGTGACCCCCTTGTTTTGTTCGTGGTTCTTTATGTGCAATATAAAGAACACTGATACAGCCCAGGAATTATATGGCTTAATTCTAATGATCCGGATATTACTGATGCTATATGACTAAAGGACCCACTATTTGTTTGAGCTGGTACGAgtgttaaacacacatttttacaaaacgATAGTGACTGCTTTATTCCCTGTACCCTACCTATTTTTGCTGCTGAATCCAGGATTGGTTTTAAAgaatttagattattttaaccAGGGTTTTATAACTTTAAGAACAGtgactgctgtttttattttgttttagcctAGGAGAGTATGGCTAATGATCTGGAGTGGAGCCCTAAATGGAAGTGCTAGAGCCCGTGGAGGACTGACTGGCTCCATACTATAGGGACTCCAATTTTACTTGTTAACGACTGGCTTTTTGGTTTGCTGAACTACCACTTCCAGAGATGCATTGGACCCTTGCTGCTCTTTattctatatttgtattcttgttTATCAAACACGTAGAGCCGAGGTTTATTTTGtgagaataaaatattgtttattgataCTTGTGCTGCCTATGCTGGGGTGTTATTTGGTCGGTGGTGTGGCTCTCATTCAGAGCTATCTCGAACCTGGGCAGCATCTGGTGAAGGGAAATATCCCAAGGTGGAGTAGTCGGAGCTACAAACTTAAGAGTGCCACTGTGACATAACTATGGCTCATTCTCTTTAAAGCCTGAGAAATCCTGTCAACATATTGGATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92162 True 1466 lncRNA 0.45 2 37160988 37163326

Neighbor

gene id symbol gene type direction distance location
AMCG00014853 cyh2,cyth4,LOC107558519,LOC107555099 coding upstream 130926 37000630 ~ 37030062 (+)
AMCG00014852 NA coding upstream 246485 36913400 ~ 36914503 (+)
AMCG00014850 NA coding upstream 427735 36617665 ~ 36733253 (+)
AMCG00014848 tmprss3,LOC107748899 coding upstream 863265 36295716 ~ 36297723 (+)
AMCG00014837 NA coding upstream 1609181 35551157 ~ 35551807 (+)
AMCG00014862 NA coding downstream 533334 37696660 ~ 37706352 (+)
AMCG00014864 NA coding downstream 590469 37753795 ~ 37754523 (+)
AMCG00014863 NA coding downstream 591533 37754859 ~ 37755848 (+)
AMCG00014870 NA coding downstream 738471 37901797 ~ 37904976 (+)
AMCG00014867 NA coding downstream 772265 37935591 ~ 37944752 (+)
G73748 NA non-coding upstream 219167 36838829 ~ 36941821 (+)
G73739 NA non-coding upstream 388247 36772485 ~ 36772741 (+)
G73689 NA non-coding upstream 471923 36654955 ~ 36689065 (+)
G73641 NA non-coding upstream 660858 36490183 ~ 36500130 (+)
G73638 NA non-coding upstream 683038 36476608 ~ 36477950 (+)
G73802 NA non-coding downstream 9605 37172931 ~ 37173176 (+)
G73806 NA non-coding downstream 79909 37243235 ~ 37243446 (+)
G73828 NA non-coding downstream 134351 37297677 ~ 37298128 (+)
G73829 NA non-coding downstream 136059 37299385 ~ 37299598 (+)
G73832 NA non-coding downstream 161696 37325022 ~ 37325324 (+)
AMCG00014836 NA other upstream 1748401 35390634 ~ 35412587 (+)
G73343 NA other upstream 2200541 34942011 ~ 34960447 (+)
G73329 NA other upstream 2380398 34780122 ~ 34780590 (+)
G73292 LOC100846954 other upstream 2921588 34238934 ~ 34239400 (+)
G73244 NA other upstream 3794888 33364755 ~ 33366100 (+)
G73850 NA other downstream 354782 37518108 ~ 37518406 (+)
G74114 NA other downstream 1269048 38432374 ~ 38432861 (+)
G74227 NA other downstream 1647367 38810693 ~ 38811128 (+)
G74348 NA other downstream 2172942 39336268 ~ 39475819 (+)
AMCG00014909 ankrd54 other downstream 2420712 39584038 ~ 39588507 (+)

Expression


Co-expression Network