Gene
RNA
| Item | Value |
|---|---|
| gene id | G73850 |
| gene name | NA |
| gene type | unknown |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 37518108 ~ 37518406 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU92227 | True | 299 | TUCP | 0.46 | 1 | 37518108 | 37518406 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014853 | cyh2,cyth4,LOC107558519,LOC107555099 | coding | upstream | 488046 | 37000630 ~ 37030062 (+) |
| AMCG00014852 | NA | coding | upstream | 603605 | 36913400 ~ 36914503 (+) |
| AMCG00014850 | NA | coding | upstream | 784855 | 36617665 ~ 36733253 (+) |
| AMCG00014848 | tmprss3,LOC107748899 | coding | upstream | 1220385 | 36295716 ~ 36297723 (+) |
| AMCG00014837 | NA | coding | upstream | 1966301 | 35551157 ~ 35551807 (+) |
| AMCG00014862 | NA | coding | downstream | 178254 | 37696660 ~ 37706352 (+) |
| AMCG00014864 | NA | coding | downstream | 235389 | 37753795 ~ 37754523 (+) |
| AMCG00014863 | NA | coding | downstream | 236453 | 37754859 ~ 37755848 (+) |
| AMCG00014870 | NA | coding | downstream | 383391 | 37901797 ~ 37904976 (+) |
| AMCG00014867 | NA | coding | downstream | 417185 | 37935591 ~ 37944752 (+) |
| G73848 | NA | non-coding | upstream | 5799 | 37511836 ~ 37512309 (+) |
| G73838 | NA | non-coding | upstream | 141493 | 37376275 ~ 37376615 (+) |
| G73832 | NA | non-coding | upstream | 192784 | 37325022 ~ 37325324 (+) |
| G73829 | NA | non-coding | upstream | 218510 | 37299385 ~ 37299598 (+) |
| G73828 | NA | non-coding | upstream | 219980 | 37297677 ~ 37298128 (+) |
| G73852 | NA | non-coding | downstream | 13210 | 37531616 ~ 37532213 (+) |
| G73872 | NA | non-coding | downstream | 80322 | 37598728 ~ 37602411 (+) |
| G73890 | NA | non-coding | downstream | 129197 | 37647603 ~ 37647880 (+) |
| G73895 | NA | non-coding | downstream | 162961 | 37681367 ~ 37681639 (+) |
| G73896 | NA | non-coding | downstream | 164909 | 37683315 ~ 37683542 (+) |
| AMCG00014836 | NA | other | upstream | 2105521 | 35390634 ~ 35412587 (+) |
| G73343 | NA | other | upstream | 2557661 | 34942011 ~ 34960447 (+) |
| G73329 | NA | other | upstream | 2737518 | 34780122 ~ 34780590 (+) |
| G73292 | LOC100846954 | other | upstream | 3278708 | 34238934 ~ 34239400 (+) |
| G73244 | NA | other | upstream | 4152008 | 33364755 ~ 33366100 (+) |
| G74114 | NA | other | downstream | 913968 | 38432374 ~ 38432861 (+) |
| G74227 | NA | other | downstream | 1292287 | 38810693 ~ 38811128 (+) |
| G74348 | NA | other | downstream | 1817862 | 39336268 ~ 39475819 (+) |
| AMCG00014909 | ankrd54 | other | downstream | 2065632 | 39584038 ~ 39588507 (+) |
| AMCG00014913 | NA | other | downstream | 2088481 | 39606887 ~ 39621186 (+) |
