G74030 (LOC106607450,LOC105029658,LOC103393291,LOC102224681,LOC103147375,LOC101072687)


Basic Information

Item Value
gene id G74030
gene name LOC106607450,LOC105029658,LOC103393291,LOC102224681,LOC103147375,LOC101072687
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 38177974 ~ 38180598 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU92433
tttttttgtattatttatttatttattatgaagagacatacagagacttgcttaaaattaaataaaattacaaataaagcaaaacaaaacaaaaaaaatctttagaaCTCTatccatatttatatatgtacatagtTGGtggtccctctctctctctctctctctctctctctctccccctttcatCCCTCCATCTTCTAGTGCTGGCGTTTGGGTTTAAAGTGCACATGTGAACCATCAGCTCTATATGGGTGCAAACTTCTTGGCCTGAGCTCTGACTCTCTTCTCATACTCCATCCTGTTCTGAcagtatatagtgtatgccTCTGCCTGTGCTGGGTCCTGGATGTTTGGTTCATTCAGCAGCTCCTGGACTCCCAATAGGATCTGTTTGATTGTGATGGCAGGTCTCCAGTCTTTGTCCTCCTCCAGGATGGACAGACAAACAGTGCCGGACGGATAGACGTTGGGGTGGAAGATGGGAGGCTCGAATTTACATTTGGGCGGTGACGAGGGGTAATCATCCTTAAACAGCATCCTGAGTTTGTActgccctccctcccacagAGTCTGTGGAGACAAGAGACCATGAATGAGCCAGCACTGTATAGATTAAAGTGCAGTATAGTATGGGGGCCCAGTCTcgagccagtgctgtgtggactatagtattgTTTAGTATAGGGCCTAGTTGGACAGATACTCACCCCTTTCTTGCCTGGAATGGCACATTCCCAGTTCATAAGATTCAGGGTGCCATCAGCATTCTTGGTGGGCACTGCCACAAACCCCTAGGGTAGGTACACAACAAGTAATTACAGGGGCTCAGTTggtctcagtgttacagtgttacagtatagtcagacacacagagatacaaaGCCTTAGAAAGACAAAGATACAGGCagtgacagaaagagagagagactcacaaAGGGATGGTCCTTGCGCCAGGCTTTGCGTTCCTGCGCCAGTCTGCTGAGAGCAATCCCGGACATTGCTGCTCATCCACACCCCCTGCTTAAAAATCCGAAATCTAatatttaagataaataaaagttaaacaGACAAGCTATACTGTCGCAAAGGTCTCCACCCTCCTTTGTTCCCTCTCTATGTCTTCTGGCCgattctctatctctctttcaCTCCCGCTCTCTTTCGTGTGACAGTACTGAAACTAGTTAAGAGCGATCGCTGCTGTCAAATTGCTCCGGGGCTGGAAAGGGGGGAAAGTGTTCA
>TU92434
tttttttgtattatttatttatttattatgaagagacatacagagacttgcttaaaattaaataaaattacaaataaagcaaaacaaaacaaaaaaaatctttagaaCTCTatccatatttatatatgtacatagtTGGtggtccctctctctctctctctctctctctctctctccccctttcatCCCTCCATCTTCTAGTGCTGGCGTTTGGGTTTAAAGTGCACATGTGAACCATCAGCTCTATATGGGTGCAAACTTCTTGGCCTGAGCTCTGACTCTCTTCTCATACTCCATCCTGTTCTGAcagtatatagtgtatgccTCTGCCTGTGCTGGGTCCTGGATGTTTGGTTCATTCAGCAGCTCCTGGACTCCCAATAGGATCTGCAACAACAGCACACCATCTCACT

Function

NR:

description
SUMO-conjugating enzyme UBC9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92433 True 1242 lncRNA 0.45 5 38177974 38180598
TU92434 False 413 lncRNA 0.39 2 38180047 38180598

Neighbor

gene id symbol gene type direction distance location
AMCG00014879 NA coding downstream 17887 38141907 ~ 38160087 (-)
AMCG00014878 NA coding downstream 49229 38126043 ~ 38128745 (-)
AMCG00014874 NA coding downstream 125862 38047486 ~ 38052112 (-)
AMCG00014875 dnal4,dnal4b,LOC108261343,LOC106591471,LOC108436609,LOC108412416 coding downstream 137923 38037363 ~ 38040051 (-)
AMCG00014871 NA coding downstream 223662 37945147 ~ 37954312 (-)
AMCG00014883 NA coding upstream 80932 38261530 ~ 38263484 (-)
AMCG00014885 NA coding upstream 122454 38303052 ~ 38317017 (-)
AMCG00014886 syngr1,syngr1a coding upstream 149533 38330131 ~ 38339363 (-)
AMCG00014888 cacng2,LOC103372897,LOC102214005,LOC101463732,LOC100710835,LOC108237679 coding upstream 183304 38363902 ~ 38402794 (-)
AMCG00014889 NA coding upstream 234804 38415402 ~ 38423841 (-)
G73980 NA non-coding downstream 106357 38063347 ~ 38071617 (-)
G73918 NA non-coding downstream 351272 37826479 ~ 37826702 (-)
G73911 NA non-coding downstream 473926 37703846 ~ 37704048 (-)
G73908 NA non-coding downstream 494432 37683239 ~ 37683542 (-)
G73866 NA non-coding downstream 595812 37581766 ~ 37582162 (-)
G74052 NA non-coding upstream 100839 38281437 ~ 38283517 (-)
G74093 NA non-coding upstream 128487 38309085 ~ 38340216 (-)
G74128 NA non-coding upstream 307664 38488262 ~ 38488479 (-)
G74137 NA non-coding upstream 325594 38506192 ~ 38575968 (-)
G74167 NA non-coding upstream 468324 38648922 ~ 38649290 (-)
AMCG00014865 NA other downstream 313491 37802094 ~ 37864483 (-)
G73916 NA other downstream 394399 37779333 ~ 37783575 (-)
G73833 NA other downstream 852667 37325020 ~ 37325307 (-)
AMCG00014845 NA other downstream 1784481 36373151 ~ 36393493 (-)
G73612 NA other downstream 1923787 36253774 ~ 36254187 (-)
G74087 NA other upstream 162724 38343322 ~ 38350291 (-)
G74107 NA other upstream 231562 38412160 ~ 38413231 (-)
G74115 NA other upstream 251665 38432263 ~ 38432875 (-)
AMCG00014891 NA other upstream 308021 38488619 ~ 38492954 (-)
G74160 NA other upstream 416770 38597368 ~ 38644538 (-)

Expression


Co-expression Network