G74368


Basic Information

Item Value
gene id G74368
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39232304 ~ 39238764 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU92846
GTGCACAGTGAACTACGCTCCCCAACCAGGAAGTGCGAGGCGGAGAGCCGCGGCTGGAAGCGAGCCCCGCCAGCAACACAGTTCGTTCTGGAATGCGAGTGCGGGCAGGGCACACCTATGACATCATCCCCAATCCCGCACCAACACACGCGTCTGCGGGGCTGCACGGAGGGCACCGAGCTCACTCAACCAGGGGAGTCGAAAGGAAATGACAACACTTATGTCCAGGAACCCCCGGCCCAACACACAGATCCGAGAATCCACTAAACAGTCACACCGGTGCACCCGAGGGGAGCAGCACTGACCACCGAGTGGCAGCCCCGCAGCGGCCCGCTCCCGCACACCGGGACAGGAAGTCCTGCTCGGCACGTTAAACACGGCCTGCAGCGAGCAGCCCTCCTGCCTGGTAGCCCTGTGGCCTGCAGCGGGGCTCTGCCGGCCCGGGTGCGGCGTGCGGGCCCTACTGGGCCGAGAGCGGCCGCGCAGCTGCCCGAGGCGAACCGGTTCGGACGGATGGCAGGCAGGCGAGTGCGCATGCGCAGTGCAGTACCGGCTGGGGGCCGCGGTTACAGCAGGAAGTGAGACGGCAAGCGAGCAGCGAGGAAGCGGAGCAGCGGAGCTGAACACACCGCCCGCCGACAGCCGCGGCCCGCAGCGCACACCCGCCCTGCCCCCACGGGCAAAGTCTAACTGCAAGAGCTACCTCTACGAGCTGGGCTCCCCCGCAGCCTCACTCCACCCGCCCCGGCCCGGGCTCAGTGCACCCCGGCCACAGCGAGGACCGCCTGGGCTTCaaaccctctccctccctctccctcatgGATCACTTCCTGCACTAACTTCTACGGTTTCTTTGCGCAGTTAGACAGACCCGAGCAGCGCCCACCCGCCCCGCACCTCCAGCACCAACTCACTCACACACCGCGCCGGCACCGGACGGCAGCGCACAGCCGGACTCCGCGCCCTCCTACCTGGCGGCGGACCGTGAGCGCCCTACCTGCGGGATTGTAGGACAGGGAGGTcggcagtgagtgtgtgtccggGTCGCTGCTCGCTGGGACGGGAGTCTGTGCGCGTCTGTCGCCGCGACTCTTCACGGGCTCTGGAGTCTCGCGTCTCGCACGGCAGGGCGCGGCCGGCGGGGGGGGCGGGGCCTCGGCGCCGGCATCCGCCTTCCGCGCCCAATCAGCAGCCGGCGGGACTCTCGCAGTGGGCCGGGCTCAGCCAATGGCGGGGCAGGGAAGGGGCGGGACTCGGGGCGCAGTGTGAGCCGGATGGAGAGACGCGGAGATAAGCGAGTGTTTAATTACTGAGTGGATGGATTCCAGTCCCTGCAGTTCCAGACCTGCTCTTCCTGTATCGAATTTCAAACTCAAATACATGAGGGTGTGCTGAGccacctggagagagagagagagagagagagaggcagggagggataGAGGAGTGAGAGGGGGACTCTACAATGGCTGCCTGCCATAATCCCTGTACAGTCTCGATAGGTCATCTGTGTTGGAAACATTTCTGACAATGGTCACGGCGACAAAACACCTCAAATTGAACTGAATGGAGTGAGGAGCATGCGGTGTCTGTGTTCAGGGGGCAGGTGAGTGCGGTGTCTGTGTTCAGGGGGCAGATGAGTTCAGGCCAGGAGGGAGCAGCTCGTTGCAGTGGAATGCTAATTGCCTCTGAAGACGAGGGAGGGACAGATGTGCTCTGACTGATGGAGGAGAGGAATGTGAATGACATCGCTGAGCAACTGCCACACCCCCCCTCACCTCTCCAGTGTGTGTATGGTAGTGTTCAGTACACTtagcactgcacacacacaagcctcCCCAGCCctgaacacacatacacatacacacacccccCTCAGCACTAAACACACAGAAGAACATAGGAAAGTgtacaattgagaggaggccattcgccccatcgtgcttgtgatccaaggatcctatccagtctgtttttgaattttcccaaattgtctcttcaaccacatcactgggagtttgttcagattgtgacgcctctctgtgtgaagaagtgtctcctgttttctgtcttgaatgccttgaagcccaatttccatttgtgtccccgggtccatgtccccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttggatcaagtccccacgtagtctcctctgttccagggtgaaaaggttcaggtcctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagcgatatctttcttgaagtgtggagcccagaactgtccacagtatgcAGATGAGctctacacacacaccttcagcactgactatatacacacacacacacacatgaacccCTGGATGAATAgctgacacagacacagctctCAGAGCATCTTGCTAtgaatttattcacatttattttcacattaaaataataaattctcAATCTCCTGAGACCCTCACCTCCCTACTGCAGTGCTTcgcagcacagagacacacagatggacagacaagtgtagacagacagacagactcctACAGGCAGGACTGAACAGGGATGTGCCTGAGGGCTGGTGGTCAGGCTGTGGCTCAAAGTGGCCAGAGCAGAGGCAGCACTGAGCTATGCTGTGGCTTCACACAGTCAGGCCGGACAGGAGGGCCAGACTCCTCGGTCCGAGCGCTTCACAGCAGACTGACGGACTGCTCTCATCTAGGACCAGCTGCCCCTCTTACATGGGGGAGGGCTGCCCCCCTGTGGTCAGATGCAGAACCGCAGTCTGGCCAGGAGAatgacagagtgagagagacagacagacacagaaagataTGACAGACAGACGCCCAAACCTAACCAGACTGCCAGCACTGGGCTGActgacagagggacagacagagagacagcagaAGCCTGGGCTCCAGTGGACTCTCTGGGGTCAGAGTTCACAGGGGACCCAGGTTGCGGGCACAGCCTCACTGTCCAATCAGCTTGCTGACAAAGGCATCCAGCTGGTCCTCGTCTTTGATGCCGACAAACTTATCAACGACATCGCCGCCCTTCATAGCGATCACTGTGGGAACGGCCGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92846 True 3154 lncRNA 0.59 4 39232304 39238764

Neighbor

gene id symbol gene type direction distance location
AMCG00014901 NA coding downstream 15206 39205047 ~ 39217098 (-)
AMCG00014902 NA coding downstream 55643 39138823 ~ 39176661 (-)
AMCG00014897 NA coding downstream 395952 38728989 ~ 38836352 (-)
AMCG00014895 NA coding downstream 544243 38676409 ~ 38688061 (-)
AMCG00014894 gtpbp1,gtpb1,LOC106606809,LOC106601690 coding downstream 603104 38600421 ~ 38629200 (-)
AMCG00014903 NA coding upstream 24377 39263141 ~ 39270244 (-)
AMCG00014905 NA coding upstream 43390 39282154 ~ 39285347 (-)
AMCG00014910 NA coding upstream 292562 39531326 ~ 39536843 (-)
AMCG00014915 NA coding upstream 353850 39592614 ~ 39599496 (-)
AMCG00014917 NA coding upstream 401647 39640411 ~ 39641256 (-)
G74307 NA non-coding downstream 49670 39182366 ~ 39182634 (-)
G74277 NA non-coding downstream 190256 39002622 ~ 39042048 (-)
G74239 NA non-coding downstream 364378 38867561 ~ 38867926 (-)
G74232 NA non-coding downstream 395165 38836895 ~ 38837139 (-)
G74224 NA non-coding downstream 428419 38802916 ~ 38803885 (-)
G74367 LOC103154960,LOC103154959,LOC107580460,LOC107576269,LOC106912990 non-coding upstream 55187 39293951 ~ 39299385 (-)
G74384 NA non-coding upstream 63160 39301924 ~ 39302208 (-)
G74385 NA non-coding upstream 64257 39303021 ~ 39303224 (-)
G74386 NA non-coding upstream 66944 39305708 ~ 39305970 (-)
G74387 NA non-coding upstream 75802 39314566 ~ 39315128 (-)
G74247 LOC100136012,LOC107575789 other downstream 311951 38898095 ~ 38920353 (-)
G74160 NA other downstream 587766 38597368 ~ 38644538 (-)
AMCG00014891 NA other downstream 739350 38488619 ~ 38492954 (-)
G74115 NA other downstream 799429 38432263 ~ 38432875 (-)
G74107 NA other downstream 819073 38412160 ~ 38413231 (-)
G74375 myh9,LOC100380669 other upstream 19298 39258062 ~ 39260360 (-)
AMCG00014906 NA other upstream 139411 39378175 ~ 39379153 (-)
AMCG00014914 ankrd54,LOC107563363,LOC107728844,LOC107559232,LOC107670919,LOC107719341 other upstream 351732 39590496 ~ 39591658 (-)
G74477 NA other upstream 399135 39637899 ~ 39638957 (-)
G74569 NA other upstream 662706 39901470 ~ 39983396 (-)

Expression


Co-expression Network