G74375 (myh9,LOC100380669)


Basic Information

Item Value
gene id G74375
gene name myh9,LOC100380669
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39258062 ~ 39260360 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU92854
cccccactgccctCCTCTCCCCCACCATGGCAGGAGGAGCCTCTTTACatagattaattttattttctttatttcatttaatatagGACTATAAAAAGGCAAAACccaataatagtagtagtagtaatagaaATACACTGTGAGAGATACAGGGAGATGCATGAGTGGGGGGTGGGCAGCCGTGTCCAGAGCAGTAGGACTCACAGGCACTGGTGGCTGGGGGCTGCGGGAACAGTCCTCTCTCTACTTCCCTCCATCCGTGATCACTGATCAAGTCTCCCAGTAGAGAGACCTGTCCGACTGCACTAGAGGCCCTCCCCGCCCGCCCTGAGACACCTGCACAGAAACCACAAAGCTTAACAACCAGAGACCCTGAGGCCAACAGTGAGTGTTAAAAGGCAAGTGGGTTTCTTGGCCAGTGTACGGACTGTGCGAGCACACGCACATGCCTACAGGTGTGCAGATCCACGCGTAGCAAGCCGCTATAACCGTTTACGTGTGCTAGATactgcatgcgtgtgtgtgagcgGTGTCCAATGGTCGGCGCTGCAAGAAAAGCCACCCGTGTTGCTGATGCATGCGTCTGCGCGAGTGGACACGTGTGTACACGATCATACCAGCTGTGACTGAAGCATGTAgtccagcacagtgcagtgcagtacagtacagtacagtacagtatggaGCAGTGCAGAGATGCAGTGGAGTACAGCCCCCTCTACTGgcagcagtgcagtacagccaCACAGCGATACAAGAGTACGGGTGCATCGATTAACTACACAGATGGAGGAAGATACAGATATGAACATTATATAACCTGAttacatgagaaaaaaaaaaaaaaaaagcgaaaaatatatataaccacATCGGAGAGGTTGGCTTTAACTATCTGAACAGCGCAAGATTATTTGGTCCCTGTGCGATTAGAGGTGGAGGCAGTGACCCCCTACCGACAGTAGAAAAATAGTCAGGCCGTCCGACAGGCCCGTGCTTTCAAAATACCATCGGCAATAATACCAGCGAGAGCAGAGATAGCGGGAGAATCAGCCATTGTGCGTCGGTCAGAGTGAGCGCGTGCGTCGCGGCTGTCGGCCCTCCCTCTCGCTCAGGCAGGATTGTCAGAGCACACAGCGGAGGTCAGATTGGAGTTTACCCCCGTGACCCTCAGAAGCAGAGCCTCGGCCTtgagggggggaggggatgCCTGGGATGAGAGTAATAACAAGCAGGAATGGAGAGGGAGGGCAGAGAGACTGAGTGcgatattgtgtgtgtgtgtgtgtgtgtcacccaGACTCCACTGCCACTGTCCTGCAGTCTCTCACACTGGAGCTCCCACTCAAGATGGTTACTCTATCAGAGAGCTAGGGATGCCGAATTAACATCCAGCCAATCAGAGCCAATTAAGACCCTAGGTGCTGGGTGGCGGAGACTGTTGTGCTGTGGGGGGGTAAGTGTGCAAGCTGGGGCAAGATTGTCTATGTGAGGGTCAGTGTGACAGACTGTTAGGGTGACTGTGTACGTCAGTGTGAGTATTTGTTGCTGGGATTGtgtctgtgtccgtgtgtgtgagtgaggtgTGCAGGTGCGCAGTGGCCATCCTCCAGCCAGTGGGTGGCACTTGTAGCCTCACTCTGGTTTGGGCTCGCTGCTCTCGCTCTTGACCTCGCCCTCCTCGTCACTGTCCACCCCCCGGCTCATCATGCGGCTGCGCAGGGCGCTGACCTCACGGTTCATGGAGTCGGCGCTCTCAGTCAGGTCCTCCAGCTCGCGCTGCATCTTCCTGCGGGCTGCATTGGCACGCTGggcctcctcctctgcctcctccagcTGCCGCTTCAGCTGCTTCACGCGGCTGTTCATCTTTTCAGCCTGGTCCTTGTACTGCTCACTGTTGCGTCTCTCGTCATCCACCTGCAGCACCACCTCCTTCAGCTTCTTTTCCGAGCGGCGGACCAGCTTGGAGGACTGCTGCCTCTCCCTGTGGAGACCGAGAGCCTCAGTACAGTCCCCAGTCC
>TU92855
cccccactgccctCCTCTCCCCCACCATGGCAGGAGGAGCCTCTTTACatagattaattttattttctttatttcatttaatatagGACTATAAAAAGGCAAAACccaataatagtagtagtagtaatagaaATACACTGTGAGAGATACAGGGAGATGCATGAGTGGGGGGTGGGCAGCCGTGTCCAGAGCAGTAGGACTCACAGGCACTGGTGGCTGGGGGCTGCGGGAACAGTCCTCTCTCTACTTCCCTCCATCCGTGATCACTGATCAAGTCTCCCAGTAGAGAGACCTGTCCGACTGCACTAGAGGCCCTCCCCGCCCGCCCTGAGACACCTGCACAGAAACCACAAAGCTTAACAACCAGAGACCCTGAGGCCAACAGTGAGTGTTAAAAGGCAAGTGGGTTTCTTGGCCAGTGTACGGACTGTGCGAGCACACGCACATGCCTACAGGTGTGCAGATCCACGCGTAGCAAGCCGCTATAACCGTTTACGTGTGCTAGATactgcatgcgtgtgtgtgagcgGTGTCCAATGGTCGGCGCTGCAAGAAAAGCCACCCGTGTTGCTGATGCATGCGTCTGCGCGAGTGGACACGTGTGTACACGATCATACCAGCTGTGACTGAAGCATGTAgtccagcacagtgcagtgcagtacagtacagtacagtacagtatggaGCAGTGCAGAGATGCAGTGGAGTACAGCCCCCTCTACTGgcagcagtgcagtacagccaCACAGCGATACAAGAGTACGGGTGCATCGATTAACTACACAGATGGAGGAAGATACAGATATGAACATTATATAACCTGAttacatgagaaaaaaaaaaaaaaaaagcgaaaaatatatataaccacATCGGAGAGGTTGGCTTTAACTATCTGAACAGCGCAAGATTATTTGGTCCCTGTGCGATTAGAGGTGGAGGCAGTGACCCCCTACCGACAGTAGAAAAATAGTCAGGCCGTCCGACAGGCCCGTGCTTTCAAAATACCATCGGCAATAATACCAGCGAGAGCAGAGATAGCGGGAGAATCAGCCATTGTGCGTCGGTCAGAGTGAGCGCGTGCGTCGCGGCTGTCGGCCCTCCCTCTCGCTCAGGCAGGATTGTCAGAGCACACAGCGGAGGTCAGATTGGAGTTTACCCCCGTGACCCTCAGAAGCAGAGCCTCGGCCTtgagggggggaggggatgCCTGGGATGAGAGTAATAACAAGCAGGAATGGAGAGGGAGGGCAGAGAGACTGAGTGcgatattgtgtgtgtgtgtgtgtgtgtcacccaGACTCCACTGCCACTGTCCTGCAGTCTCTCACACTGGAGCTCCCACTCAAGATGGTTACTCTATCAGAGAGCTAGGGATGCCGAATTAACATCCAGCCAATCAGAGCCAATTAAGACCCTAGGTGCTGGGTGGCGGAGACTGTTGTGCTGTGGGGGGGTAAGTGTGCAAGCTGGGGCAAGATTGTCTATGTGAGGGTCAGTGTGACAGACTGTTAGGGTGACTGTGTACGTCAGTGTGAGTATTTGTTGCTGGGATTGtgtctgtgtccgtgtgtgtgagtgaggtgTGCAGGTGCGCAGTGGCCATCCTCCAGCCAGTGGGTGGCACTTGTAGCCTCACTCTGGTTTGGGCTCGCTGCTCTCGCTCTTGACCTCGCCCTCCTCGTCACTGTCCACCCCCCGGCTCATCATGCGCCGCACATTGAAGGGCAGGTCCCCGCGCCTGGGAGACAGAAGCTCGTTAATCAATTATAAACATCCAGACATTGATATGTCCACAGTAGACAGAGTCC

Function

symbol description
myh9 Enables several functions, including adenyl ribonucleotide binding activity; integrin binding activity; and protein homodimerization activity. Contributes to actin filament binding activity and microfilament motor activity. Involved in several processes, including actin cytoskeleton organization; myeloid cell differentiation; and negative regulation of actin filament severing. Acts upstream of or within actin filament-based movement. Located in several cellular components, including actin cytoskeleton; immunological synapse; and myosin II filament. Part of myosin II complex. Colocalizes with COP9 signalosome. Implicated in several diseases, including auditory system disease (multiple); autosomal dominant Alport syndrome; blood platelet disease (multiple); end stage renal disease; and orofacial cleft. Biomarker of MYH-9 related disease.

NR:

description
Myosin-9, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92854 True 2024 TUCP 0.54 4 39258062 39260360
TU92855 False 1811 lncRNA 0.53 2 39258530 39260360

Neighbor

gene id symbol gene type direction distance location
AMCG00014901 NA coding downstream 40964 39205047 ~ 39217098 (-)
AMCG00014902 NA coding downstream 81401 39138823 ~ 39176661 (-)
AMCG00014897 NA coding downstream 421710 38728989 ~ 38836352 (-)
AMCG00014895 NA coding downstream 570001 38676409 ~ 38688061 (-)
AMCG00014894 gtpbp1,gtpb1,LOC106606809,LOC106601690 coding downstream 628862 38600421 ~ 38629200 (-)
AMCG00014903 NA coding upstream 2781 39263141 ~ 39270244 (-)
AMCG00014905 NA coding upstream 21794 39282154 ~ 39285347 (-)
AMCG00014910 NA coding upstream 270966 39531326 ~ 39536843 (-)
AMCG00014915 NA coding upstream 332254 39592614 ~ 39599496 (-)
AMCG00014917 NA coding upstream 380051 39640411 ~ 39641256 (-)
G74368 NA non-coding downstream 19298 39232304 ~ 39238764 (-)
G74307 NA non-coding downstream 75428 39182366 ~ 39182634 (-)
G74277 NA non-coding downstream 216014 39002622 ~ 39042048 (-)
G74239 NA non-coding downstream 390136 38867561 ~ 38867926 (-)
G74232 NA non-coding downstream 420923 38836895 ~ 38837139 (-)
G74367 LOC103154960,LOC103154959,LOC107580460,LOC107576269,LOC106912990 non-coding upstream 33591 39293951 ~ 39299385 (-)
G74384 NA non-coding upstream 41564 39301924 ~ 39302208 (-)
G74385 NA non-coding upstream 42661 39303021 ~ 39303224 (-)
G74386 NA non-coding upstream 45348 39305708 ~ 39305970 (-)
G74387 NA non-coding upstream 54206 39314566 ~ 39315128 (-)
G74247 LOC100136012,LOC107575789 other downstream 337709 38898095 ~ 38920353 (-)
G74160 NA other downstream 613524 38597368 ~ 38644538 (-)
AMCG00014891 NA other downstream 765108 38488619 ~ 38492954 (-)
G74115 NA other downstream 825187 38432263 ~ 38432875 (-)
G74107 NA other downstream 844831 38412160 ~ 38413231 (-)
AMCG00014906 NA other upstream 117815 39378175 ~ 39379153 (-)
AMCG00014914 ankrd54,LOC107563363,LOC107728844,LOC107559232,LOC107670919,LOC107719341 other upstream 330136 39590496 ~ 39591658 (-)
G74477 NA other upstream 377539 39637899 ~ 39638957 (-)
G74569 NA other upstream 641110 39901470 ~ 39983396 (-)
G74593 NA other upstream 674533 39934893 ~ 40012081 (-)

Expression


Co-expression Network