Gene
RNA
| Item | Value |
|---|---|
| gene id | G74486 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 39682255 ~ 39722288 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0031399 | regulation of protein modification process | biological_process |
| GO:0031400 | negative regulation of protein modification process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU92991 | False | 216 | lncRNA | 0.41 | 2 | 39682255 | 39722288 |
| TU92992 | True | 221 | lncRNA | 0.41 | 2 | 39695162 | 39722288 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00014911 | mcm5,LOC106607002 | coding | upstream | 45694 | 39630690 ~ 39636561 (+) |
| AMCG00014912 | gcat | coding | upstream | 56055 | 39623426 ~ 39626200 (+) |
| AMCG00014907 | hmgxb4,LOC106607053,LOC106601319 | coding | upstream | 106667 | 39565733 ~ 39575588 (+) |
| AMCG00014908 | NA | coding | upstream | 152444 | 39511772 ~ 39529811 (+) |
| AMCG00014904 | ttc26,LOC106607033 | coding | upstream | 292568 | 39381101 ~ 39389687 (+) |
| AMCG00014922 | NA | coding | downstream | 110180 | 39832468 ~ 39846425 (+) |
| AMCG00014921 | wbp11 | coding | downstream | 153912 | 39876200 ~ 39887566 (+) |
| AMCG00014926 | LOC106607097,LOC107574926 | coding | downstream | 165812 | 39888100 ~ 39899640 (+) |
| AMCG00014929 | NA | coding | downstream | 263017 | 39985305 ~ 39990486 (+) |
| AMCG00014931 | NA | coding | downstream | 391840 | 40114128 ~ 40140409 (+) |
| G74491 | NA | non-coding | upstream | 22297 | 39659533 ~ 39659958 (+) |
| G74484 | NA | non-coding | upstream | 22743 | 39647829 ~ 39659512 (+) |
| G74459 | NA | non-coding | upstream | 80157 | 39601852 ~ 39602098 (+) |
| G74442 | NA | non-coding | upstream | 97096 | 39584922 ~ 39585159 (+) |
| G74422 | NA | non-coding | upstream | 182595 | 39498703 ~ 39499660 (+) |
| G74505 | NA | non-coding | downstream | 4178 | 39726466 ~ 39734537 (+) |
| G74511 | NA | non-coding | downstream | 21837 | 39744125 ~ 39744360 (+) |
| G74513 | NA | non-coding | downstream | 29909 | 39752197 ~ 39752551 (+) |
| G74516 | NA | non-coding | downstream | 33102 | 39755390 ~ 39755664 (+) |
| G74521 | NA | non-coding | downstream | 73824 | 39796112 ~ 39840618 (+) |
| AMCG00014913 | NA | other | upstream | 61069 | 39606887 ~ 39621186 (+) |
| AMCG00014909 | ankrd54 | other | upstream | 93748 | 39584038 ~ 39588507 (+) |
| G74348 | NA | other | upstream | 206436 | 39336268 ~ 39475819 (+) |
| G74227 | NA | other | upstream | 871127 | 38810693 ~ 38811128 (+) |
| G74114 | NA | other | upstream | 1249394 | 38432374 ~ 38432861 (+) |
| AMCG00014923 | NA | other | downstream | 142794 | 39865082 ~ 39875428 (+) |
| AMCG00014925 | NA | other | downstream | 228900 | 39951188 ~ 39953278 (+) |
| AMCG00014928 | NA | other | downstream | 241480 | 39963768 ~ 39973070 (+) |
| G74642 | NA | other | downstream | 437613 | 40159901 ~ 40160578 (+) |
| G74643 | NA | other | downstream | 439728 | 40162016 ~ 40163997 (+) |
