G74505


Basic Information

Item Value
gene id G74505
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 39726466 ~ 39734537 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU93013
CGACTCGACCCGCAGGCCGTCTGTGCTCTGACTGCAGCCTCTGCTCTGTCAGGACACTCCTCCTCATCAACCCCACAGGAACACGTCAGCAGAGCCTGCAGGGCGTCTGGGCGTCTCTATTCCCCAGGTGAGAGATCTGTCCACCTGCAGCCGAGCAGGAAGTGCTGCCTCTCAGAGCAGAGAGACGCTGAAGAGGAGAGATGGCGTCTGTGAGCTCAGCCCCGGAGCCTGtGAGTGGAGGAGCAGCTGCAGAGGGAAGCCCAGGAGAGACTGCAGCCCAGCCTGAGGCCTCCAGCTCTGAGGAGAAGACTGTGGAGAGGCCTGGAGCCCCGTGAGCACCGAGGAGGACCAGAGTCTGGGAGGCGGAGGACACTGCAGCCTGGACACACACTGAGTCTGGACACACACTGTtccaaataattgtaataataatgtaatatattaaacatttttgaatgattttaaaagttttttgtaCATTCCACTCCAATTCCAACTGGGATCCCGTTTCCTCTTGCCTGTCTCTGAATGTTATTACACCTTGGAGCCACAGAGCAGCACTGCAGCCCACAGAGAGCCCGA
>TU93014
GTCACAGAGCTGCTGGACAAGATAGAGGAGATGGTGGCAGAGAACAGAGGAGACatgagagagacaggagagggagagacagaagagGAGAAAATTATGGGAGTGATGCCAATGATATATAAGCCAGGGAGGAAACCAAAGTACCTGTTAGGAGGAGGAACAGCATTACTGCCCCTCCATTCAtGAGTGGAGGAGCAGCTGCAGAGGGAAGCCCAGGAGAGACTGCAGCCCAGCCTGAGGCCTCCAGCTCTGAGGAGAAGACTGTGGAGAGGCCTGGAGCCCCGTGAGCACCGAGGAGGACCAGAGTCTGGGAGGCGGAGGACACTGCAGCCTGGACACACACTGAGTCTGGACACACACTGTtccaaataattgtaataataatgtaatatattaaacatttttgaatgattttaaaagttttttgtaCATTCCACTCCAATTCCAACTGGGATCCCGTTTCCTCTTGCCTGTCTCTGAATGTTATTACACCTTGGAGCCACAGAGCAGCACTGCAGCCCACAGAGAGCCCGA

Function

GO: NA

KEGG:

id description
ko00980 Metabolism of xenobiotics by cytochrome P450

RNA

RNA id representative length rna type GC content exon number start site end site
TU93013 True 582 lncRNA 0.55 2 39726466 39734537
TU93014 False 534 lncRNA 0.50 2 39733723 39734537

Neighbor

gene id symbol gene type direction distance location
AMCG00014918 NA coding upstream 18714 39707534 ~ 39707752 (+)
AMCG00014919 NA coding upstream 19033 39707061 ~ 39707433 (+)
AMCG00014911 mcm5,LOC106607002 coding upstream 89905 39630690 ~ 39636561 (+)
AMCG00014912 gcat coding upstream 100266 39623426 ~ 39626200 (+)
AMCG00014907 hmgxb4,LOC106607053,LOC106601319 coding upstream 150878 39565733 ~ 39575588 (+)
AMCG00014922 NA coding downstream 97931 39832468 ~ 39846425 (+)
AMCG00014921 wbp11 coding downstream 141663 39876200 ~ 39887566 (+)
AMCG00014926 LOC106607097,LOC107574926 coding downstream 153563 39888100 ~ 39899640 (+)
AMCG00014929 NA coding downstream 250768 39985305 ~ 39990486 (+)
AMCG00014931 NA coding downstream 379591 40114128 ~ 40140409 (+)
G74486 NA non-coding upstream 4178 39682255 ~ 39722288 (+)
G74491 NA non-coding upstream 66508 39659533 ~ 39659958 (+)
G74484 NA non-coding upstream 66954 39647829 ~ 39659512 (+)
G74459 NA non-coding upstream 124368 39601852 ~ 39602098 (+)
G74442 NA non-coding upstream 141307 39584922 ~ 39585159 (+)
G74511 NA non-coding downstream 9588 39744125 ~ 39744360 (+)
G74513 NA non-coding downstream 17660 39752197 ~ 39752551 (+)
G74516 NA non-coding downstream 20853 39755390 ~ 39755664 (+)
G74521 NA non-coding downstream 61575 39796112 ~ 39840618 (+)
G74557 NA non-coding downstream 252965 39987502 ~ 40006654 (+)
AMCG00014913 NA other upstream 105280 39606887 ~ 39621186 (+)
AMCG00014909 ankrd54 other upstream 137959 39584038 ~ 39588507 (+)
G74348 NA other upstream 250647 39336268 ~ 39475819 (+)
G74227 NA other upstream 915338 38810693 ~ 38811128 (+)
G74114 NA other upstream 1293605 38432374 ~ 38432861 (+)
AMCG00014923 NA other downstream 130545 39865082 ~ 39875428 (+)
AMCG00014925 NA other downstream 216651 39951188 ~ 39953278 (+)
AMCG00014928 NA other downstream 229231 39963768 ~ 39973070 (+)
G74642 NA other downstream 425364 40159901 ~ 40160578 (+)
G74643 NA other downstream 427479 40162016 ~ 40163997 (+)

Expression


Co-expression Network