G74736


Basic Information

Item Value
gene id G74736
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40338064 ~ 40360225 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU93327
NGTACtctacagcacagagagagagacagaggggttACTACACACAGGTACTctacagcacagagagaaagacagaggggTTACTACACACatagggacagggacagagaacagggacagagggagtggTGGGTAACATAGTTGCCCCCAGTGAGAGCGCAGTTACCCTGGGGATAGTTGGGGGGGAGGCCTGTGTAGTTGCAAGCTCCATTCACCAGCACACAGCGGTTCCACAAGTCTGTGCTCATGGTCTCTGTGAACCACCAggcctgagggagagagagagagaaagagagagagtcagtgcATCTCAGTATACAGGTGTAGTTATACAGATATGTAGCTGTACAGGTATACAGGTGTGCAGGTGTGTAGGAATGGGGGTATAGAGGTGTGCAGGTTTCCAGGTGTGCAGGTATAGAGCTGTACAGGTATAGATGTGTACAGGTGTGCAGGAATGGGAGTATAGAGGCACTCACATTGTCAATGGTGGCGATGAGCAGCAGGACGATGACGAGGATGTGAAGGAGGAAGATTCCAGCAAGAAGGACCAACATGGTGCCactactgagagagagaatatatctattgaataatgtattacttgatacactattttttttacatttttaacaaatatgaatttacttctaattgtataatttgacctgtttattatttgtaaatgttgaCCATGAATATATGCATGCAAAAGTATGTGTTTGACATTGATTACGAATGCTCTGGCAAAACGTATTCTGGTAGagtccagtcagtcagacagacacTGTCAGTACAGTACGGTGTCAATACAGGGGCCCAGGGGGGTGTGGCCCCTGGGAACCGTGCTGAGCTCTGAGCACATCAGGGTGTGTCAGTGAACACAACGGACACATTCCTCTGCACTGGCCCCTGTCAGTGGTGTGCATTACACTGCTGCTATCAGGATCGCAATTACTACTACTGTTGGAGAGATACTGGCATTCTacagacaagcacacacatCAGGGAAAAGTACATTACAGTGAGCAGCACAACAaccacaatatataaatacatacatctattCATAAATAAAGATCGCGATAGATAGATTAAAGGCTTCTTGCAGATTTCCACTAGAAGGAATTGCATTGATTGGTGTTGATACACACTGTCACGGAGAGATACATCCAGACAGAAGAACACTTTTCACGCCACGAAACGCACAGAAAGACGGAGGAGAGTCcacggacagacacacagctcgGGGACTGAGTGCGCACTCGGCTGCTCGCAGAAAAGGGCGGGCGCGACGGGAGGACAACAcgcaaaatacacacaaacacacacgaaCACGCAAAACACACACGAACACGCAaaacacacgcaaacacacacgaACACGCAAAACACACACGAATACGCCTCTTACGGGCGGTCAACCAAACACGTACACAAACTACAACACGCGTATGCCGAGCGTGATTACTATGATTAGTAGCGGTGTAGTATCTTACCTCACGGTTGCAGTGTTTCTGCTCTGCGCTgctgtgcgtgtctgtctgtctgtaagtGTACACACCTCGACTGCAAAATGATAGATCTTTTACGACGATTGTTATATCAATGTGTAGCCTATTACTCCAGCCTGTTGCACAGCTGTGGACAAAACTGGTTTTCGGCCACTTTCCAcgtccaggagagagagagagagagagagagggagggagggaatgcACACTTTCCTCCAGAGAAGGGAAACAACAGTATCTATCTTTCAGACTCCCTTGTCCCACAACACTGACAACACACTGATCACCAACTTTCAGAGACTCTGAAATGGAGATccgcagagagagagggagagagaaaagttacAATCTGCAGCGTCTCTCCGGACTCCACAATAACGGCAACTTCAAACAGCCCCGATGTAAACCGTAAAGAGTACGAGAACTGCGAGGATTTGGAGGAAAAGTCTCACCCACGAAACACTACGCGCTGCCCGTCTGTCcgcgtctgtctgtgtgcgtctccgCCAGCAAGATAGAGCCAGCGACCcgccctccctctgtctcttttcCTCCTCCCGCcgtcttcctctctccctccctttccctctccctctctcacacaggcACCCACTCACCAGTCTGTAAAAACCTCTCCCTTTCTCCGTGCAGTTTATCAACacagtgctgtagtgtccagtcagt
>TU93328
gagagagagagagagagagagagagagagagagagggagggagggaatgcACACTTTCCTCCAGAGAAGGGAAACAACAGTATCTATCTTTCAGACTCCCTTGTCCCACAACACTGACAACACACTGATCACCAACTTTCAGAGACTCTGAAATGGAGATccgcagagagagagggagagagaaaagttacAATCTGCAGCGTCTCTCCGGACTCCACAATAACGGCAACTTCAAACAGCCCCGATGTAAACCGTAAAGAGTACGAGAACTGCGAGGATTTGGAGGAAAAGTCTCACCCACGAAACACTACGCGCTGCCCGTCTGTCcgcgtctgtctgtgtgcgtctccgCCAGCAAGATAGAGCCAGCGACCcgccctccctctgtctcttttcCTCCTCCCGCcgtcttcctctctccctccctttccctctccctctctcacacaggcACCCACTCACCAGTCTGTAAAAACCTCTCCCTTTCTCCGTGCAGTTTATCAACacagtgctgtagtgtccagtcagt

Function

GO:

id name namespace
GO:0060841 venous blood vessel development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93327 True 2198 lncRNA 0.48 3 40338064 40340395
TU93328 False 529 lncRNA 0.53 2 40338064 40360225

Neighbor

gene id symbol gene type direction distance location
AMCG00014945 LOC107382204 coding downstream 22126 40308887 ~ 40315938 (-)
AMCG00014934 NA coding downstream 173484 40162386 ~ 40164580 (-)
AMCG00014933 NA coding downstream 177715 40153419 ~ 40160349 (-)
AMCG00014935 NA coding downstream 230399 40085776 ~ 40107665 (-)
AMCG00014930 NA coding downstream 298739 40029772 ~ 40039325 (-)
AMCG00014952 NA coding upstream 34278 40394503 ~ 40398556 (-)
AMCG00014953 zgc:158803,LOC108258445,LOC105898746,LOC105916152,LOC105012183,LOC107700834 coding upstream 50649 40410874 ~ 40416728 (-)
AMCG00014950 naga,nagab,LOC102776695 coding upstream 69157 40429382 ~ 40431042 (-)
AMCG00014957 NA coding upstream 525790 40886015 ~ 40898700 (-)
AMCG00014959 LOC107676178 coding upstream 551969 40912194 ~ 40922866 (-)
G74725 NA non-coding downstream 38885 40296861 ~ 40299179 (-)
G74625 NA non-coding downstream 198963 40101893 ~ 40139101 (-)
G74633 NA non-coding downstream 208698 40128921 ~ 40129366 (-)
G74611 NA non-coding downstream 294774 40043007 ~ 40043290 (-)
G74597 NA non-coding downstream 332997 39962930 ~ 40005067 (-)
G74738 NA non-coding upstream 5735 40365960 ~ 40368045 (-)
G74845 NA non-coding upstream 75215 40435440 ~ 40435670 (-)
G74854 NA non-coding upstream 285957 40646182 ~ 40646384 (-)
G74860 NA non-coding upstream 335762 40695987 ~ 40696241 (-)
G74864 NA non-coding upstream 343686 40703911 ~ 40704607 (-)
G74726 NA other downstream 33979 40303231 ~ 40304085 (-)
AMCG00014946 NA other downstream 43538 40281194 ~ 40294526 (-)
AMCG00014938 NA other downstream 69579 40235058 ~ 40268485 (-)
G74593 NA other downstream 325983 39934893 ~ 40012081 (-)
G74569 NA other downstream 354668 39901470 ~ 39983396 (-)
AMCG00014951 poldip3 other upstream 41558 40401783 ~ 40410777 (-)
AMCG00014949 ndua6,ndufa6 other upstream 77034 40437259 ~ 40534709 (-)
G74862 NA other upstream 337628 40697853 ~ 40698276 (-)
G74870 NA other upstream 422615 40782840 ~ 40783230 (-)
AMCG00014958 NA other upstream 546000 40906225 ~ 40909451 (-)

Expression


Co-expression Network