G74738


Basic Information

Item Value
gene id G74738
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 40365960 ~ 40368045 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU93330
ATGACGTCAGCGGCCGGCCGGAGCTGCATCTGCGACGAGGAGACAGCGCTAGATTCAGTGACCgattcaaaataatcataatcataatgcAAATGATAATCATAAAGTCGTCTTTCATTTTTGAATAAATGCTATTAACAAAGCACAACGTCTATCGGGAATATTGTTCttcttgtaattattattagagCTTCTGCGCTATGACTGTTTCCTAATGATCTGTGCATGTGAGAGAGTCTGTGAAGCGGAGACGTGCACAGATCCagcggacagacagacagacagacacagggatGCCGGCGCCTCGTCATCACTAGGactggCCTGTCCCTTGTGTCTCTCCGTGCTGTGAGGGGTACAGAGGACTGGACTCTGCTGACTGCAGTAACCTTCTCTGGCTACAAGGAGCCCCTGTTTCTGAAGCCCTCAGACCCATCCCTCTATAGctaTGTCCCATTTCCTGGAGTGGTTTGTGCCAGTGTACCTGCTGGTGTCagtgctggtgctgctgggcTTTggtgcctgcatctactactgTGAGCCAGGGCTGCAGGAGGCGCACAAGTGGAGTACGCAGCGCCGCCTGGTGGGCCGGGGGAGGAACTGCAAGACACTACTGGCTCAAGATAACCTGGGCTACAGAGAGCCCGAGGTGTGAGAGTCAGACTGAGACAGGGGAAGAGGGATagaggtggagagagggagaaagggtgTAGTACAGAAAAGCAGtattcactgactgactgacagacttacACAatgactaactgactgacagacacactgactgactaactgatacactgactgactgactgacacactgactgatatactgactgattgacacactgactgatatactgactgattgacacactgactgactgattgacacactgactgactgactgacacacatacacactgactgactgactgatacactgactgactggacacgtCCGCATATTAATACTGCCCTGAGACGGAGAGAGATAGATAGTGGAAGGGAGAGACAAAGAAAggtggaaagagaaagagaatgagagatagatagatagatagaacacaataataataataataataataataataatgtaaataaaaacttgtgccaaaaagagacagacagagggagacagagagagagagacagcaacaGAGAAAGGCTGGAGCACAGGAGATAGTATTCAGACAGTattccccatctctctctctcttggaaACTTGAGTATGGACTAAgccatttaaaacacaacaataacaacgataataataacgataataataataatgccaaatATTTACCTGTCTGTCATATGAAGATGTCAGGATGGATTCATTAAGCAATTACAGAACCAATTAAAGAATTAGCTGCCATAGCAACCAGGAGCCCCACTGTTCTTGGTGTGCGAGTGTTTTTCAGACCAAACAAACCAATTGCCAAACTCTCCATTTCAaactattgtgtgtgttttcttactGCGTCGTGTACGCACAGCtctgtatgtcagtgtgttgaGAGTGAGTGCATCGGCCCTCATCAGCACAAAGTGTATAAGGAGCAGGCATTGCGGTGTTCTGgccaattaataaaacatgatattaaaataaa

Function

GO:

id name namespace
GO:0015672 monovalent inorganic cation transport biological_process
GO:0030001 metal ion transport biological_process
GO:0006811 ion transport biological_process
GO:0006812 cation transport biological_process
GO:0006814 sodium ion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93330 True 1621 lncRNA 0.45 4 40365960 40368045

Neighbor

gene id symbol gene type direction distance location
AMCG00014944 sept3,LOC106952311 coding downstream 6258 40348222 ~ 40359702 (-)
AMCG00014945 LOC107382204 coding downstream 50022 40308887 ~ 40315938 (-)
AMCG00014934 NA coding downstream 201380 40162386 ~ 40164580 (-)
AMCG00014933 NA coding downstream 205611 40153419 ~ 40160349 (-)
AMCG00014935 NA coding downstream 258295 40085776 ~ 40107665 (-)
AMCG00014952 NA coding upstream 26458 40394503 ~ 40398556 (-)
AMCG00014953 zgc:158803,LOC108258445,LOC105898746,LOC105916152,LOC105012183,LOC107700834 coding upstream 42829 40410874 ~ 40416728 (-)
AMCG00014950 naga,nagab,LOC102776695 coding upstream 61337 40429382 ~ 40431042 (-)
AMCG00014957 NA coding upstream 517970 40886015 ~ 40898700 (-)
AMCG00014959 LOC107676178 coding upstream 544149 40912194 ~ 40922866 (-)
G74736 NA non-coding downstream 5735 40338064 ~ 40360225 (-)
G74725 NA non-coding downstream 66781 40296861 ~ 40299179 (-)
G74625 NA non-coding downstream 226859 40101893 ~ 40139101 (-)
G74633 NA non-coding downstream 236594 40128921 ~ 40129366 (-)
G74611 NA non-coding downstream 322670 40043007 ~ 40043290 (-)
G74845 NA non-coding upstream 67395 40435440 ~ 40435670 (-)
G74854 NA non-coding upstream 278137 40646182 ~ 40646384 (-)
G74860 NA non-coding upstream 327942 40695987 ~ 40696241 (-)
G74864 NA non-coding upstream 335866 40703911 ~ 40704607 (-)
G74875 NA non-coding upstream 453649 40821694 ~ 40822155 (-)
G74726 NA other downstream 61875 40303231 ~ 40304085 (-)
AMCG00014946 NA other downstream 71434 40281194 ~ 40294526 (-)
AMCG00014938 NA other downstream 97475 40235058 ~ 40268485 (-)
G74593 NA other downstream 353879 39934893 ~ 40012081 (-)
AMCG00014951 poldip3 other upstream 33738 40401783 ~ 40410777 (-)
AMCG00014949 ndua6,ndufa6 other upstream 69214 40437259 ~ 40534709 (-)
G74862 NA other upstream 329808 40697853 ~ 40698276 (-)
G74870 NA other upstream 414795 40782840 ~ 40783230 (-)
AMCG00014958 NA other upstream 538180 40906225 ~ 40909451 (-)

Expression


Co-expression Network