G75049


Basic Information

Item Value
gene id G75049
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 41450100 ~ 41451333 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU93700
TCTTTTATTTAaacctgaaaagaaaatgtctccATACTGtatcaaaaacagacatttagttttataatttCAACTACACAGAAAATTAACATTCTCCTTCTTTTCAACTGCTCAGGAGAAGACTACAAACAAGAACAGatgagcaagagagagagagggaggggagccAGGCAGAGTGGGGGTCTCCCGCAGTGAGTTCGGGGGTCTGTCCCACAATGCAGCTCAGCTGTACACTGTTTGTCTCGCAGCCCTGTACTGTGAACTGTACTACAATCACAACAGAGATCAGACCCTCACAGGCTACTATTGTCCTGAAGCCCAGGAGGCCGAGCCTCTCATCCCCGCCTGCTCTCCTGAAGGAAAGGGATTACACGCGTCTGGGCTGTGTACAAAACAACACTGATAACTGATACTTTACGGCTCACATGACTGCTCTCCTATACGCACCAACAAAATACTctcattgaaaatatttaaaaaaagacaataaccAAAGCAAACAGCTCCTTACCTCTGAATCAGAAAAGCTACAAGCAAAACTAAGCAACTAGATCCTTCACTAGTGAATCCCATGGCCTGTAACAGCACTGCCAGCCCTCTGAACTgaacagcaatacaaatctGAACATGAATCATCCCAACACTTAAACTCATTCAAGCCGATCAGCACTGAGCAGCACGGCGCTGGCTGTGACCGGCAGGGCAGGAGCAGCGCAGACACTCCAGTGAAATGAAGCAAAGGGAAAAGAAGTATATATACTTATGTACAATTTAATTCACATGTGACGGTGGAAGTTCTTTGGCTGCTGaagtgggattttttttttttttgcaggaggGTAAAAAACTCTGCTGTAACtaggtgtgggggggggctggtTAATCAACATTTCACATATctgacttaaaaaaacaaaaacaaacagcaattcagGAGATTTCAGAACTGGCCACATGACCAGGCCCTGCCCCCACATCTCCTGCAGCTGTGATCTCCAGCCTGCAGTTCCCCCCTGGGCTCTGTCTCAGCACAGTGCAGGAGGGTAAGGTGAGTGGGGGGGCaggagggagaaggaaaaaacaccCTTTCACGTTAACAAGCAACTGCTCTGGATTCACCAAGtccagacagagagaaagagaaaaagaaagaaagaaagggggtgagaggaaaaaaaagaggacTGTGTACTGGCTTCACTTCCTgggtggagggggaggtggtgggggcggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93700 True 1234 lncRNA 0.47 1 41450100 41451333

Neighbor

gene id symbol gene type direction distance location
AMCG00014969 NA coding upstream 264 41437580 ~ 41449836 (+)
AMCG00014965 NA coding upstream 85558 41363157 ~ 41364542 (+)
AMCG00014966 NA coding upstream 138082 41303808 ~ 41312018 (+)
AMCG00014960 NA coding upstream 408709 41037030 ~ 41041391 (+)
AMCG00014961 NA coding upstream 414328 41015868 ~ 41035772 (+)
AMCG00014976 NA coding downstream 84779 41536112 ~ 41551039 (+)
AMCG00014979 maff,LOC107734233,LOC107690056,LOC107554043,LOC107584105,LOC107692071,LOC107731405,LOC106589545 coding downstream 215445 41666778 ~ 41670067 (+)
AMCG00014986 NA coding downstream 359838 41811171 ~ 41813199 (+)
AMCG00014995 NA coding downstream 481185 41932518 ~ 41934438 (+)
AMCG00014988 pick1,LOC107572282 coding downstream 519331 41970664 ~ 41978667 (+)
G74980 NA non-coding upstream 177002 41271764 ~ 41273098 (+)
G74977 NA non-coding upstream 179632 41269927 ~ 41270468 (+)
G74973 NA non-coding upstream 183098 41266319 ~ 41267002 (+)
G74944 NA non-coding upstream 280488 41169211 ~ 41169612 (+)
G74942 NA non-coding upstream 281747 41168076 ~ 41168353 (+)
G75099 NA non-coding downstream 210821 41662154 ~ 41665444 (+)
G75115 NA non-coding downstream 250288 41701621 ~ 41785740 (+)
G75117 NA non-coding downstream 253115 41704448 ~ 41705102 (+)
G75140 zmp:0000000896 non-coding downstream 338128 41789461 ~ 41789825 (+)
G75141 NA non-coding downstream 339393 41790726 ~ 41791123 (+)
AMCG00014970 NA other upstream 27844 41418653 ~ 41422256 (+)
AMCG00014968 sox10,LOC107674484,LOC107711804,LOC107563722 other upstream 44348 41393504 ~ 41405752 (+)
AMCG00014963 kdelr3,LOC106601218,LOC108262534 other upstream 109940 41334486 ~ 41340160 (+)
G74952 NA other upstream 234858 41213950 ~ 41215242 (+)
G74925 NA other upstream 359488 41089775 ~ 41090612 (+)
G75052 NA other downstream 1110 41452443 ~ 41457150 (+)
G75067 NA other downstream 19880 41471213 ~ 41482573 (+)
AMCG00014980 LOC108431982 other downstream 319539 41770872 ~ 41774135 (+)
AMCG00015004 phf5a,PHF5A,LOC102780084,LOC107584099,LOC106609350 other downstream 646535 42097868 ~ 42100480 (+)
AMCG00015014 rbx1 other downstream 767321 42218654 ~ 42228135 (+)

Expression


Co-expression Network