G75064


Basic Information

Item Value
gene id G75064
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 41450090 ~ 41451333 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU93716
cccgcccccaccacctccccctccacccAGGAAGTGAAGCCAGTACACAgtcctcttttttttcctctcaccccctttctttctttctttttctctttctctctgtctggaCTTGGTGAATCCAGAGCAGTTGCTTGTTAACGTGAAAGggtgttttttccttctccctcctGCCCCCCCACTCACCTTACCCTCCTGCACTGTGCTGAGACAGAGCCCAGGGGGGAACTGCAGGCTGGAGATCACAGCTGCAGGAGATGTGGGGGCAGGGCCTGGTCATGTGGCCAGTTCTGAAATCTCctgaattgctgtttgtttttgtttttttaagtcagATATGTGAAATGTTGATTAaccagcccccccccacacctaGTTACAGCAGAGTTTTTTACcctcctgcaaaaaaaaaaaaaatcccacttCAGCAGCCAAAGAACTTCCACCGTCACATGTGAATTAAATTGTACATAAGTATATATACTTCTTTTCCCTTTGCTTCATTTCACTGGAGTGTCTGCGCTGCTCCTGCCCTGCCGGTCACAGCCAGCGCCGTGCTGCTCAGTGCTGATCGGCTTGAATGAGTTTAAGTGTTGGGATGATTCATGTTCagatttgtattgctgttcAGTTCAGAGGGCTGGCAGTGCTGTTACAGGCCATGGGATTCACTAGTGAAGGATCTAGTTGCTTAGTTTTGCTTGTAGCTTTTCTGATTCAGAGGTAAGGAGCTGTTTGCTTTggttattgtctttttttaaatattttcaatgagAGTATTTTGTTGGTGCGTATAGGAGAGCAGTCATGTGAGCCGTAAAGTATCAGTTATCAGTGTTGTTTTGTACACAGCCCAGACGCGTGTAATCCCTTTCCTTCAGGAGAGCAGGCGGGGATGAGAGGCTCGGCCTCCTGGGCTTCAGGACAATAGTAGCCTGTGAGGGTCTGATCTCTGTTGTGATTGTAGTACAGTTCACAGTACAGGGCTGCGAGACAAACAGTGTACAGCTGAGCTGCATTGTGGGACAGACCCCCGAACTCACTGCGGGAGACCCCCACTCTGCCTggctcccctccctctctctctcttgctcatCTGTTCTTGTTTGTAGTCTTCTCCTGAGCAGTTGAAAAGAAGGAGAATGTTAATTTTCTGTGTAGTTGaaattataaaactaaatgtctgtttttgataCAGTATggagacattttcttttcaggttTAAATAAAAGATTTGACAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93716 True 1244 lncRNA 0.46 1 41450090 41451333

Neighbor

gene id symbol gene type direction distance location
AMCG00014974 LOC108424764 coding downstream 14462 41421861 ~ 41435628 (-)
AMCG00014972 polr2f,LOC107727050,LOC107711805 coding downstream 34079 41413412 ~ 41416011 (-)
AMCG00014967 NA coding downstream 223283 41177884 ~ 41226807 (-)
AMCG00014962 NA coding downstream 459299 40989672 ~ 40990791 (-)
AMCG00014959 LOC107676178 coding downstream 527224 40912194 ~ 40922866 (-)
AMCG00014973 ddx17,LOC101071115 coding upstream 1110 41452443 ~ 41460863 (-)
AMCG00014975 dmc1 coding upstream 12261 41463594 ~ 41469552 (-)
AMCG00014977 NA coding upstream 37556 41488889 ~ 41515465 (-)
AMCG00014984 NA coding upstream 223451 41674784 ~ 41687445 (-)
AMCG00014985 NA coding upstream 237220 41688553 ~ 41689983 (-)
G75035 NA non-coding downstream 40478 41406917 ~ 41409612 (-)
G75032 sox10,LOC106607141,LOC106601158,LOC107104518 non-coding downstream 44291 41405462 ~ 41405799 (-)
G74978 NA non-coding downstream 179907 41269927 ~ 41270183 (-)
G74970 NA non-coding downstream 186183 41262768 ~ 41263907 (-)
G74950 NA non-coding downstream 238779 41211039 ~ 41211311 (-)
G75145 NA non-coding upstream 200003 41651336 ~ 41673042 (-)
G75144 NA non-coding upstream 218823 41670156 ~ 41672310 (-)
G75170 NA non-coding upstream 361000 41812333 ~ 41815261 (-)
G75241 NA non-coding upstream 526422 41977755 ~ 41991977 (-)
G75247 NA non-coding upstream 542230 41993563 ~ 42022081 (-)
AMCG00014964 kdelr3,LOC108262534,LOC107679478,LOC106607138 other downstream 118320 41329313 ~ 41331770 (-)
G74945 NA other downstream 280539 41169041 ~ 41169551 (-)
G74890 NA other downstream 516136 40931797 ~ 40933954 (-)
G74887 NA other downstream 524653 40922964 ~ 40925437 (-)
AMCG00014958 NA other downstream 540639 40906225 ~ 40909451 (-)
AMCG00014971 NA other upstream 18961 41470294 ~ 41474481 (-)
AMCG00014978 NA other upstream 86953 41538286 ~ 41561967 (-)
AMCG00014981 NA other upstream 304273 41755606 ~ 41766826 (-)
AMCG00015010 csdc2,csdc2a,LOC105919973,LOC108235856,LOC103382071,LOC101165181 other upstream 608957 42060290 ~ 42063901 (-)
G75272 LOC105025081,LOC108431941,LOC108274116,LOC107734154 other upstream 667954 42119287 ~ 42131232 (-)

Expression


Co-expression Network