G75144


Basic Information

Item Value
gene id G75144
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 41670156 ~ 41672310 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU93820
ttCTTTATActcaaaaatacatacagaaatatatatatatatttatatgactaacacaaaattaaacagcAGTGACTCCTCCCTTCAATCTATATgtcatcataataacaataacaatcaaaataataataataatacagacacAAACTGTTCCCTAGCTACTCACTGACAATACTTGCTCATATATTAAATCACTACAGCACAAGCTAGTTCAACTTCTCCTaactttagtttttctttacaaataaaatagaataaatcaGGTAAATGTGGtcgagcttttttttttcctttttcttttttatataaaaataataaaagatgaaTAGATTTTAAATAGCATTGACAGAGGAGGCAGACGCAGATTGGGCATCACTGTACTCTGCTGTtctgtactctactgcactgaCGTGTTAGTTGTGTTGCCCTATACTGAGAAATACATTCACtcacaatgtaataaaatacttaCTGTAGAATACAGCCCCATTACTGCGcgcagcacactgacacagtggAGTACAGCACAGCGGGAGTGACTGATGTGTTACACAGGCGGTATATGCGGGCAACAGTTCCTACCGCTTGCAGCAAAACAGACTGACTACAGTACATGACAGTATTGTACTAAACCAGGCTGATGTCACCTGCAGTAGAGGACAGCACACTGAAGCACAATAAACTACAGTCTGgtactgaaataaatgtcacaCTGAGCTACTGTAGGCTGTAGGCcaccagtacagcacagcactgtaaCGTGCCTTGCCGTGAGTGGCAGCTACACTTCATATTCTTGTGTCTGAGGagcagctgtctgtctgtctaagaAGTGCCCTGACCCTGTGTCCCTGTCCGTCTGTCTTGGAGCTCTTTCAACCCTGCGTCTCGGACTTGTCcccagtgtctgtctgtctgtctgtgggtgTGGACTATCTGTAATGGTCTGTCTGAGCTGCAGTGGTCTGGTCTGGTCTGAGCTGCTGGTTGGTCCCCAGTGCTGCCCTGCCCCCCTGCATCAGTCTCTACGCCAACCAAccgtctgtctgcctgcctgtctgtctgtctgtctgttggtcTGAGTGTATCAGCATCCAGCATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93820 True 1102 lncRNA 0.43 2 41670156 41672310

Neighbor

gene id symbol gene type direction distance location
AMCG00014977 NA coding downstream 154691 41488889 ~ 41515465 (-)
AMCG00014975 dmc1 coding downstream 200604 41463594 ~ 41469552 (-)
AMCG00014973 ddx17,LOC101071115 coding downstream 209293 41452443 ~ 41460863 (-)
AMCG00014974 LOC108424764 coding downstream 234528 41421861 ~ 41435628 (-)
AMCG00014972 polr2f,LOC107727050,LOC107711805 coding downstream 254145 41413412 ~ 41416011 (-)
AMCG00014984 NA coding upstream 2474 41674784 ~ 41687445 (-)
AMCG00014985 NA coding upstream 16243 41688553 ~ 41689983 (-)
AMCG00014983 csnk1e,LOC103143618,LOC101067908,LOC103468446,LOC107096663,LOC106915477 coding upstream 18567 41690877 ~ 41698688 (-)
AMCG00014982 NA coding upstream 32145 41704455 ~ 41724237 (-)
AMCG00014987 NA coding upstream 107876 41780186 ~ 41796064 (-)
G75064 NA non-coding downstream 218823 41450090 ~ 41451333 (-)
G75035 NA non-coding downstream 260544 41406917 ~ 41409612 (-)
G75032 sox10,LOC106607141,LOC106601158,LOC107104518 non-coding downstream 264357 41405462 ~ 41405799 (-)
G74978 NA non-coding downstream 399973 41269927 ~ 41270183 (-)
G74970 NA non-coding downstream 406249 41262768 ~ 41263907 (-)
G75170 NA non-coding upstream 140023 41812333 ~ 41815261 (-)
G75241 NA non-coding upstream 305445 41977755 ~ 41991977 (-)
G75247 NA non-coding upstream 321253 41993563 ~ 42022081 (-)
G75333 NA non-coding upstream 495214 42167524 ~ 42167876 (-)
G75364 NA non-coding upstream 613984 42286294 ~ 42286584 (-)
AMCG00014978 NA other downstream 108189 41538286 ~ 41561967 (-)
AMCG00014971 NA other downstream 195675 41470294 ~ 41474481 (-)
AMCG00014964 kdelr3,LOC108262534,LOC107679478,LOC106607138 other downstream 338386 41329313 ~ 41331770 (-)
G74945 NA other downstream 500605 41169041 ~ 41169551 (-)
G74890 NA other downstream 736202 40931797 ~ 40933954 (-)
AMCG00014981 NA other upstream 83296 41755606 ~ 41766826 (-)
AMCG00015010 csdc2,csdc2a,LOC105919973,LOC108235856,LOC103382071,LOC101165181 other upstream 387980 42060290 ~ 42063901 (-)
G75272 LOC105025081,LOC108431941,LOC108274116,LOC107734154 other upstream 446977 42119287 ~ 42131232 (-)
G75370 NA other upstream 619611 42291921 ~ 42292295 (-)
AMCG00015023 NA other upstream 648786 42321096 ~ 42325005 (-)

Expression


Co-expression Network