G75174


Basic Information

Item Value
gene id G75174
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 41889139 ~ 41889878 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU93854
aaaaggTTGTCAGGCTATGAAGAGATGTTTTATAAAGCCCATGTGTTAGAATGTGGAGGGGaagtgtattatatttgtaaacacGACTCGGAACAATGTGGAAATGGTTACGCGGCGCCGTAGACCCGCGTCTTTGTCTACAACTTTTGAaatttgtatctatttattttatgtcttgCTGACATCagggtttaaatatatataatataatataatataatataatatatatatataatcattgtgttatttaagttaaatagATAGACATTGTTCAGGTTAGATTTGTTATATTAGGCTTTGCAGTGCGGTCTGATGCCCGTGGCGCAGGCGGCATTAGCCTGTTGTTTTATCAGATGCTGTTTGTACACAAAGGGCTAACCCGCCATTTTGCATGAGTGACCTAAAACTTATTACTTACCTCAATGGTAAACCTGGGAACAGATGTATTAAGCTTTTATGTAGGAGAGATTGTATGTTCTTTCTCTGTTACTGCTAGGTCTATTTTCCCATCTTTAGATGAGGTTTATAAATAGTGTGTTTGGATGTGTAAAGAATATGTAAAAGTGAATGTgagtgtaaaataattatatagggAAAGGTATAGAGATGAATACAGTTGTGCTGATTAACTGAATAGGTGAAATACATTGAATGTAATTGTGAATGGTTATTTTGTGAgtatacaaaagaaagaaagaaagaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93854 True 709 lncRNA 0.34 2 41889139 41889878

Neighbor

gene id symbol gene type direction distance location
AMCG00014986 NA coding upstream 75940 41811171 ~ 41813199 (+)
AMCG00014979 maff,LOC107734233,LOC107690056,LOC107554043,LOC107584105,LOC107692071,LOC107731405,LOC106589545 coding upstream 219072 41666778 ~ 41670067 (+)
AMCG00014976 NA coding upstream 338100 41536112 ~ 41551039 (+)
AMCG00014969 NA coding upstream 439303 41437580 ~ 41449836 (+)
AMCG00014965 NA coding upstream 524597 41363157 ~ 41364542 (+)
AMCG00014995 NA coding downstream 42640 41932518 ~ 41934438 (+)
AMCG00014988 pick1,LOC107572282 coding downstream 80786 41970664 ~ 41978667 (+)
AMCG00014999 NA coding downstream 101320 41991198 ~ 42000963 (+)
AMCG00014996 NA coding downstream 115295 42005173 ~ 42009313 (+)
AMCG00014997 kcd17,LOC105025089 coding downstream 123084 42012962 ~ 42020861 (+)
G75171 pdap1a,LOC107584100,LOC107690063,LOC107734239,LOC108431950,LOC103027934 non-coding upstream 42470 41844456 ~ 41846669 (+)
G75142 NA non-coding upstream 92938 41795973 ~ 41796201 (+)
G75141 NA non-coding upstream 98016 41790726 ~ 41791123 (+)
G75140 zmp:0000000896 non-coding upstream 99314 41789461 ~ 41789825 (+)
G75115 NA non-coding upstream 103399 41701621 ~ 41785740 (+)
G75186 NA non-coding downstream 78025 41967903 ~ 41968932 (+)
G75213 aco2,LOC107554054,LOC107663183,LOC107734200,LOC107584097,LOC107692062 non-coding downstream 193255 42083133 ~ 42088458 (+)
G75284 NA non-coding downstream 324716 42214594 ~ 42216524 (+)
G75293 josd1,LOC107660868 non-coding downstream 422802 42312680 ~ 42320118 (+)
G75294 NA non-coding downstream 427992 42317870 ~ 42318316 (+)
AMCG00014980 LOC108431982 other upstream 115004 41770872 ~ 41774135 (+)
G75067 NA other upstream 406566 41471213 ~ 41482573 (+)
G75052 NA other upstream 431989 41452443 ~ 41457150 (+)
AMCG00014970 NA other upstream 466883 41418653 ~ 41422256 (+)
AMCG00014968 sox10,LOC107674484,LOC107711804,LOC107563722 other upstream 483387 41393504 ~ 41405752 (+)
AMCG00015004 phf5a,PHF5A,LOC102780084,LOC107584099,LOC106609350 other downstream 207990 42097868 ~ 42100480 (+)
AMCG00015014 rbx1 other downstream 328776 42218654 ~ 42228135 (+)
G75295 NA other downstream 499991 42389869 ~ 42405188 (+)
AMCG00015030 NA other downstream 535576 42425454 ~ 42475884 (+)
AMCG00015032 NA other downstream 737255 42627133 ~ 42629493 (+)

Expression


Co-expression Network