G75241


Basic Information

Item Value
gene id G75241
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 41977755 ~ 41991977 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU93942
CTGTACTCTGCACCAGAGATCAGCTGAcagtgtctgcgtgtgtgtagATGAGTGTGTGAATGCATGTAGTGTGTGTAAACGGagtgtgtatgcatgtgcggagtgcgtgtctgtgtttgaGGGTGTCAAGATGTATGGTCTGTGTGTGCGAGACTGTTGGCACACTGTGAGAATGGAAGCGCACTGTAAGTCTGGGAGTATATGGGGAGTGAGGTATGTGCATGTACTCGGTGTGTGTAACCTACTCTGTGTGCGGTATCCGTACGTAGCCCACTGTTCCATTGTGCGTTAGGAAAACGGAGAAAACGCATTGAGCAAAACAAAGCGACACAGAAACGAGAGGacacacattaaattaaaaaaaaaaaaaaaaaaaaaaagggtttataATTCCAGTTCATCCACTGGAAACcagcacacaattaaaatgcagactTGCTGCTTCCAATATGGACCCTTTAATATAGTATCCAGACTGGGTCCTGTACTGTATCTATCATAGTTCACTCTCACACCAACTCTCCCTGAATTTCACACACACTCGCAATGTTTCACTCTCGCTGAATTTCACTCACAATGTCTCACTCTCCCAAAATCTCACACACAATGTCTCACACTCATTGATCTTCTATCACTCACACAGGCACACTGAACAGCTACATCCTAAGACAGTATCATAAGAATGGGGGGAGATTAATTTGGTCAAGATGGGTAAAAATGTGTTGACTGAAGCTTTTCACTGTTATAGAGCACACCTGTGCTGTAGTGTATGTCTggtgtgctgtagtgtgtgcATCTGTTTCCATGCATATACTGGCCAGTGTGAGTCAGACACGCAGTGTaacaatcagtcagtcagtatcaGTCACACCTCCAACACCCTGCAGCGGATCACACCTGTACAGCCTCAGAGCCTGGCCATCCTCTCCCCCCTCACTCATCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93942 True 944 lncRNA 0.45 2 41977755 41991977

Neighbor

gene id symbol gene type direction distance location
AMCG00014991 NA coding downstream 9043 41966064 ~ 41968712 (-)
AMCG00014992 LOC107591697,LOC107720054,LOC102309547 coding downstream 127986 41845859 ~ 41849769 (-)
AMCG00014993 sh3bp1,LOC107690072,LOC107734168,LOC107692101,LOC107554025,LOC107584210,LOC107731399,LOC108273824 coding downstream 140034 41828109 ~ 41837721 (-)
AMCG00014994 NA coding downstream 155208 41815737 ~ 41822547 (-)
AMCG00014987 NA coding downstream 181691 41780186 ~ 41796064 (-)
AMCG00015001 NA coding upstream 31125 42023102 ~ 42038200 (-)
AMCG00015008 NA coding upstream 72020 42063997 ~ 42070963 (-)
AMCG00015007 aco2,LOC107554054,LOC107692062,LOC107584097,LOC107734200,LOC107731401,LOC103370792 coding upstream 91067 42083044 ~ 42097284 (-)
AMCG00015006 tef,LOC101073097 coding upstream 114920 42106897 ~ 42112141 (-)
AMCG00015012 NA coding upstream 129686 42121663 ~ 42123872 (-)
G75170 NA non-coding downstream 162494 41812333 ~ 41815261 (-)
G75145 NA non-coding downstream 304713 41651336 ~ 41673042 (-)
G75144 NA non-coding downstream 305445 41670156 ~ 41672310 (-)
G75064 NA non-coding downstream 526422 41450090 ~ 41451333 (-)
G75035 NA non-coding downstream 568143 41406917 ~ 41409612 (-)
G75247 NA non-coding upstream 1586 41993563 ~ 42022081 (-)
G75333 NA non-coding upstream 175547 42167524 ~ 42167876 (-)
G75364 NA non-coding upstream 294317 42286294 ~ 42286584 (-)
G75365 NA non-coding upstream 294681 42286658 ~ 42286893 (-)
G75367 NA non-coding upstream 297212 42289189 ~ 42289415 (-)
AMCG00014981 NA other downstream 210929 41755606 ~ 41766826 (-)
AMCG00014978 NA other downstream 415788 41538286 ~ 41561967 (-)
AMCG00014971 NA other downstream 503274 41470294 ~ 41474481 (-)
AMCG00014964 kdelr3,LOC108262534,LOC107679478,LOC106607138 other downstream 645985 41329313 ~ 41331770 (-)
G74945 NA other downstream 808204 41169041 ~ 41169551 (-)
AMCG00015010 csdc2,csdc2a,LOC105919973,LOC108235856,LOC103382071,LOC101165181 other upstream 68313 42060290 ~ 42063901 (-)
G75272 LOC105025081,LOC108431941,LOC108274116,LOC107734154 other upstream 127310 42119287 ~ 42131232 (-)
G75370 NA other upstream 299944 42291921 ~ 42292295 (-)
AMCG00015023 NA other upstream 329119 42321096 ~ 42325005 (-)
AMCG00015031 NA other upstream 516892 42508869 ~ 42521901 (-)

Expression


Co-expression Network