AMCG00015079


Basic Information

Item Value
gene id AMCG00015079
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 1545231 ~ 1546105 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015079
ATGAAAGTTTGCATAGTGTATGATACATGGAAACAAGACCGAACCATAGATGTGCAAATATCCGCCGACTACAAAAAAGAGGTGAACTTTTGGAATTATGTATTAACCAGAATCACAGATGTAACGTTTTCACTTCCTGCGTCTAACTCCGCATTCCGAGGCCACACAGAAAAGATAAGAGATACAGATAGAAATGGAAACTTCTTCTCTACGATCAAACTTATAGCTAGATATGACCCAGTGTTGCAAAAGCTTATGGATAGAGAAAGCAGAGTAACCTACCTAAGTCCTAGGATTCAGAACAAACTCATCCAGTTGTTGTTCAAAGAAGTCCAGGTGCAAATACAGAACGAGATCCAGAACACTAAATTCTATTCCGATATATCGAAAGTCGACCAGTTAAGTCAGGTGTTTAGATATGTCACCATTCCCgtagatgaaaatgaaatacctACTGAAGTGAAAATCAATGAGAATTACCTGGGTTTTCATAATGTTACAGATCAAAGTGCAGTAGGactggaaaaacacattgtggATTTCATTGAAAGTAAGGGGACAGAAATCAGTAAGTATAGGGGACAAGGCTATGATGGTGCGAGTACCATGAGCAGAGTGTACTCAGGTGTACAGAAACGAATAGCAGACAGGGAGCCCAATGCTGTATATATTCACTGTGCTGCGCACAATTTAAACCTTGTCCTAAACGATGCCTGTCAAAATGTTCCTGAGGTGAATGACTTTTATGACATTGTGCAAAGATTGTTTGTGTTCTTTAGTGGGAGCATTAAAAGGTGTGAACTACGAGATGGGCATCCAGGCACAATGCTATTCATTCATTGCGGTTCCGTTATGCAGATATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015079 True 864 mRNA 0.40 2 1545231 1546105

Neighbor

gene id symbol gene type direction distance location
AMCG00015075 apex1 coding upstream 28112 1509378 ~ 1517119 (+)
AMCG00015076 NA coding upstream 55272 1487434 ~ 1489959 (+)
AMCG00015067 NA coding upstream 651193 888014 ~ 894038 (+)
AMCG00015058 NA coding upstream 1403428 140790 ~ 141803 (+)
AMCG00015080 NA coding downstream 91676 1637781 ~ 1658932 (+)
AMCG00015082 NA coding downstream 132625 1678730 ~ 1682241 (+)
AMCG00015084 tbc1d30,LOC107658925 coding downstream 156415 1702520 ~ 1718774 (+)
AMCG00015085 NA coding downstream 179515 1725620 ~ 1742582 (+)
AMCG00015083 NA coding downstream 198590 1744695 ~ 1766702 (+)
G95270 NA non-coding upstream 1801 1540003 ~ 1543430 (+)
G95268 NA non-coding upstream 5341 1539638 ~ 1539890 (+)
G95209 NA non-coding upstream 183842 1360813 ~ 1361389 (+)
G95205 etfb non-coding upstream 190496 1347049 ~ 1354735 (+)
G95190 NA non-coding upstream 238234 1306797 ~ 1306997 (+)
G95278 NA non-coding downstream 18930 1565035 ~ 1565242 (+)
G95279 NA non-coding downstream 20320 1566425 ~ 1566701 (+)
G95298 NA non-coding downstream 197437 1743542 ~ 1772882 (+)
G95415 NA non-coding downstream 444523 1990628 ~ 2080837 (+)
G95464 NA non-coding downstream 584633 2130738 ~ 2131893 (+)
AMCG00015077 NA other upstream 5673 1518658 ~ 1539558 (+)
G95117 NA other upstream 606245 879089 ~ 938986 (+)
G95078 LOC107575789 other upstream 998486 546229 ~ 546745 (+)
AMCG00015081 LOC107701070 other downstream 36089 1582194 ~ 1596895 (+)
AMCG00015092 NA other downstream 439880 1985985 ~ 2021856 (+)
AMCG00015096 NA other downstream 545570 2091675 ~ 2103854 (+)
G95486 NA other downstream 654832 2200937 ~ 2217102 (+)
AMCG00015102 NA other downstream 671095 2217200 ~ 2227951 (+)

Expression


Co-expression Network