AMCG00015080


Basic Information

Item Value
gene id AMCG00015080
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 1637781 ~ 1658932 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015080
catctcatcaatattataatcaatacttgtgaataataatcattaacctctgcattgccagttgcattggaaggtaatttgcagttaatacattgcaagaaaggaatgtgaactgctgataaccacgttaggagtaacagcacaccaaggacaaaggcaggataggatgttaaaATTTTTCCCCCACACTGGGAATTGAGGTTtctccagaaaataaaattgaattgtcATCTTGTGTttctaaatgtgtattaaaattaaatcgtTTACTAAATTGTGGTGTATGTCCAGGTGGAGGCACTGCAGGCTCAAATGGAAGAACAGACCAAATTAGCCAAGGAGCAGGTGGAGTCTTTATTGGAGGACCGCCGCATCAGAGTAGAGGAAGCGCAAATGCAAAATCAGCGAGATCAGGACAGGATTTCCTCTCTCACTGACAAGTTGCACAGAACACAGGGCTTGCTTTATGAAAGTACCAGGGACTTCCTGAAGTTGAAGTTTGAATGCAGGGCCAACGAGAAGAATTGGATGGCAGAGAAGGACCGTCTCTTGAGAGAGCTGGACACCTGTAAGGAAAGACTGCAAGACGGCCATGATCCCAATCAGCGCATCTTCCACTTGGCCCAACTACCTGACAAGGAGTCTCCACATGTGCACAAGGAGGAAATCAAGGCCATTGAGGAACAGTTCAAACAGGCACACCGCTTGGCAGACATGTACAGGGAGCAGTGTGTGAGTCTGGAGAGTGAGCTAGCACAgataagagagagaggagatgtgAGCAGGGACATTTTCAAGGAGCGCTCCCAAAAAATGGCCAAGAGGCTGGAATTACTGACCAAGCGATACGAGGCCCTGGAGAAGCGACGCTCCATGGAGGTGGAGGGCTTCAAGACGGACATCAAACACCTGCGCCAGAAATTAAAGGAGGTGGAGAAGCAGCTGTTTAAGGTAACATTGAATGTGGGACCAGACCAGGACTTGGCAATACTTGATGAAGTCCGACAGACCAACACTCGCACCAAACACATCCAGGGGGATCTTAAGATATTGAAGGCCAAAATATACGAACTAGAAAATGAATTAAGATTCTGTTAATATCAGCAATCTTTCATATTATAAGGTAGAAAAGagctcttaaaaataaaaaa

Function

GO: NA

KEGG:

id description
K16757 CCDC77; coiled-coil domain-containing protein 77

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015080 True 1151 mRNA 0.44 5 1637781 1658932

Neighbor

gene id symbol gene type direction distance location
AMCG00015079 NA coding upstream 91676 1545231 ~ 1546105 (+)
AMCG00015075 apex1 coding upstream 120662 1509378 ~ 1517119 (+)
AMCG00015076 NA coding upstream 147822 1487434 ~ 1489959 (+)
AMCG00015067 NA coding upstream 743743 888014 ~ 894038 (+)
AMCG00015058 NA coding upstream 1495978 140790 ~ 141803 (+)
AMCG00015082 NA coding downstream 19798 1678730 ~ 1682241 (+)
AMCG00015084 tbc1d30,LOC107658925 coding downstream 43588 1702520 ~ 1718774 (+)
AMCG00015085 NA coding downstream 66688 1725620 ~ 1742582 (+)
AMCG00015083 NA coding downstream 85763 1744695 ~ 1766702 (+)
AMCG00015089 NA coding downstream 129905 1788837 ~ 1807672 (+)
G95279 NA non-coding upstream 71080 1566425 ~ 1566701 (+)
G95278 NA non-coding upstream 72539 1565035 ~ 1565242 (+)
G95270 NA non-coding upstream 94351 1540003 ~ 1543430 (+)
G95268 NA non-coding upstream 97891 1539638 ~ 1539890 (+)
G95209 NA non-coding upstream 276392 1360813 ~ 1361389 (+)
G95298 NA non-coding downstream 84610 1743542 ~ 1772882 (+)
G95415 NA non-coding downstream 331696 1990628 ~ 2080837 (+)
G95464 NA non-coding downstream 471806 2130738 ~ 2131893 (+)
G95514 NA non-coding downstream 609398 2268330 ~ 2268552 (+)
G95516 NA non-coding downstream 614362 2273294 ~ 2334520 (+)
AMCG00015081 LOC107701070 other upstream 40886 1582194 ~ 1596895 (+)
AMCG00015077 NA other upstream 98223 1518658 ~ 1539558 (+)
G95117 NA other upstream 698795 879089 ~ 938986 (+)
G95078 LOC107575789 other upstream 1091036 546229 ~ 546745 (+)
AMCG00015092 NA other downstream 327053 1985985 ~ 2021856 (+)
AMCG00015096 NA other downstream 432743 2091675 ~ 2103854 (+)
G95486 NA other downstream 542005 2200937 ~ 2217102 (+)
AMCG00015102 NA other downstream 558268 2217200 ~ 2227951 (+)
G95618 NA other downstream 998553 2657485 ~ 2658751 (+)

Expression


Co-expression Network