AMCG00015082


Basic Information

Item Value
gene id AMCG00015082
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 1678730 ~ 1682241 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015082
ATGGCGTCTCAGGTACACATCAGCCAAAATGAACTTTTGGAAATTGACATTTGTTCACAAGTAGAAAACGACGTATTTTCTGGATTTCATCAGTGGGTTCCCGGACACAAAACCaggctgttgaaaggaaataacGACTTCGCCGATACTAACAACACAGCACGCCCGAGCCAAGACCAAGTCCCAAACACTGAGGTTAGGGACGATATGGAACATATTAATACCGAGCATCTGTACGAGGACAACGCAGAGACCAGTTTTGTTTTACGTTCATCTATACTAGATGGTCTTCTCGTTGAGCTGTATGACACTTACATCAGCTCTAGCAGGAAGAGTGTGGATAGCGTTGATAGTTCAACCGAGGCGTCCAGTTCGGAAGCCTTTCTCGGCCGAAGCAATACCGGATCAAACTTCTTACAGGAACTACTAGAGAAACACACCAGACAGCATCAAATGAAGTATCTGACCCaaaaagATATGGAGGAGCTGAAGTGGATGATTCTAGAGGTGAAATATCGAATAGGGATACAGTCAGCGAAGCTTGTCAGACAACTTAAGAGAAAGGACCGACTGCACAACAAGCTCcagaaaaacactgacattaTAACAGCATGTCTACAAGCTGTGTCTCAGAAAAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015082 True 639 mRNA 0.44 2 1678730 1682241

Neighbor

gene id symbol gene type direction distance location
AMCG00015080 NA coding upstream 19798 1637781 ~ 1658932 (+)
AMCG00015079 NA coding upstream 132625 1545231 ~ 1546105 (+)
AMCG00015075 apex1 coding upstream 161611 1509378 ~ 1517119 (+)
AMCG00015076 NA coding upstream 188771 1487434 ~ 1489959 (+)
AMCG00015067 NA coding upstream 784692 888014 ~ 894038 (+)
AMCG00015084 tbc1d30,LOC107658925 coding downstream 20279 1702520 ~ 1718774 (+)
AMCG00015085 NA coding downstream 43379 1725620 ~ 1742582 (+)
AMCG00015083 NA coding downstream 62454 1744695 ~ 1766702 (+)
AMCG00015089 NA coding downstream 106596 1788837 ~ 1807672 (+)
AMCG00015086 NA coding downstream 167644 1849885 ~ 1870853 (+)
G95279 NA non-coding upstream 112029 1566425 ~ 1566701 (+)
G95278 NA non-coding upstream 113488 1565035 ~ 1565242 (+)
G95270 NA non-coding upstream 135300 1540003 ~ 1543430 (+)
G95268 NA non-coding upstream 138840 1539638 ~ 1539890 (+)
G95209 NA non-coding upstream 317341 1360813 ~ 1361389 (+)
G95298 NA non-coding downstream 61301 1743542 ~ 1772882 (+)
G95415 NA non-coding downstream 308387 1990628 ~ 2080837 (+)
G95464 NA non-coding downstream 448497 2130738 ~ 2131893 (+)
G95514 NA non-coding downstream 586089 2268330 ~ 2268552 (+)
G95516 NA non-coding downstream 591053 2273294 ~ 2334520 (+)
AMCG00015081 LOC107701070 other upstream 81835 1582194 ~ 1596895 (+)
AMCG00015077 NA other upstream 139172 1518658 ~ 1539558 (+)
G95117 NA other upstream 739744 879089 ~ 938986 (+)
G95078 LOC107575789 other upstream 1131985 546229 ~ 546745 (+)
AMCG00015092 NA other downstream 303744 1985985 ~ 2021856 (+)
AMCG00015096 NA other downstream 409434 2091675 ~ 2103854 (+)
G95486 NA other downstream 518696 2200937 ~ 2217102 (+)
AMCG00015102 NA other downstream 534959 2217200 ~ 2227951 (+)
G95618 NA other downstream 975244 2657485 ~ 2658751 (+)

Expression


Co-expression Network