AMCG00015085


Basic Information

Item Value
gene id AMCG00015085
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 1725620 ~ 1742582 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015085
ATGTCTCagacaGTAATGATCTACCTGATTGACAAGGTCCTCCCTGACAGTTACTTCGCCAACAACTTGCGTGCATTGTCTGTGGATATGGCAGTTTTCCGAGACCTATTGAGGGAGGTGGAGCGGCTGTTATTTGTGTCCCACCGTGGGACAGTAGTTGTTGGCATTCAATTCAGCTGGATCGCTGCAGTAGAACCATCAGGATCAATGATCAGAAGGGTGAGGCCGACCACGGCCATCATCAGGATTCAGCACTGTTCCTCGATTGGGGTTGTAGGCGTTTCTACTGGTAGCTATGAGCCCCCCCTCACCAATGTATTCACAATGCAGTGGTTCTTGACCATGTTTGCCACTTGCCTACCCAACCACATTGTTCTGAAGATCTGGGACTCCGTGTTTTTTGAAGGTTCTGAGGTCCTTTTGAGAGTGGCACTGGCTATCTGGAACAAGCTTGGAGAgcGGATAGAGAGTTGTCAAAGTGCTGATGAATTCTACAGTACTATGGGATGTTTGACCCAGGAGATGCTGGAACACAACCTGATCGACTCCAATGACCTGATGCAGGTTGGTAAAGGACAGGGCTTTCCATTTCACCAAGTTATCCCGAAGCTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015085 True 615 mRNA 0.49 5 1725620 1742582

Neighbor

gene id symbol gene type direction distance location
AMCG00015084 tbc1d30,LOC107658925 coding upstream 6846 1702520 ~ 1718774 (+)
AMCG00015082 NA coding upstream 43379 1678730 ~ 1682241 (+)
AMCG00015080 NA coding upstream 66688 1637781 ~ 1658932 (+)
AMCG00015079 NA coding upstream 179515 1545231 ~ 1546105 (+)
AMCG00015075 apex1 coding upstream 208501 1509378 ~ 1517119 (+)
AMCG00015083 NA coding downstream 2113 1744695 ~ 1766702 (+)
AMCG00015089 NA coding downstream 46255 1788837 ~ 1807672 (+)
AMCG00015086 NA coding downstream 107303 1849885 ~ 1870853 (+)
AMCG00015087 NA coding downstream 138662 1881244 ~ 1886142 (+)
AMCG00015090 NA coding downstream 189828 1932410 ~ 1940759 (+)
G95279 NA non-coding upstream 158919 1566425 ~ 1566701 (+)
G95278 NA non-coding upstream 160378 1565035 ~ 1565242 (+)
G95270 NA non-coding upstream 182190 1540003 ~ 1543430 (+)
G95268 NA non-coding upstream 185730 1539638 ~ 1539890 (+)
G95209 NA non-coding upstream 364231 1360813 ~ 1361389 (+)
G95298 NA non-coding downstream 960 1743542 ~ 1772882 (+)
G95415 NA non-coding downstream 248046 1990628 ~ 2080837 (+)
G95464 NA non-coding downstream 388156 2130738 ~ 2131893 (+)
G95514 NA non-coding downstream 525748 2268330 ~ 2268552 (+)
G95516 NA non-coding downstream 530712 2273294 ~ 2334520 (+)
AMCG00015081 LOC107701070 other upstream 128725 1582194 ~ 1596895 (+)
AMCG00015077 NA other upstream 186062 1518658 ~ 1539558 (+)
G95117 NA other upstream 786634 879089 ~ 938986 (+)
G95078 LOC107575789 other upstream 1178875 546229 ~ 546745 (+)
AMCG00015092 NA other downstream 243403 1985985 ~ 2021856 (+)
AMCG00015096 NA other downstream 349093 2091675 ~ 2103854 (+)
G95486 NA other downstream 458355 2200937 ~ 2217102 (+)
AMCG00015102 NA other downstream 474618 2217200 ~ 2227951 (+)
G95618 NA other downstream 914903 2657485 ~ 2658751 (+)

Expression


Co-expression Network