AMCG00015099


Basic Information

Item Value
gene id AMCG00015099
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2140341 ~ 2201333 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015099
ATGGCAACAGCACCACCAAAACACTGTCAAGACCTCGGGCTCCGATCTCTAGTACCGCTCGCTCAACTGCAGCTCCGAGGTCATCACCAGACTACGGACTCAGCTGACCGACGGCTGACCATCAGCGCTGCCTCCAGCCTGGCCTATGACCTCATTGTGAGCTCTGATCCAGTCTCCACTGTGGTGCCAGACAGACAGGCCAGAGTGAACTGGACAGGACCCTGCGGACATGCAGAGGACAGCAACTCCACAGGGTGCTGTGCTCTGCAGCTTGTCGTCCCCCCCGGCCCTGTGGCTGGGGCAGTAGGAGGCAGCATGAGGCTCATCACCTCTGTCAATCCACCAACAACATTACTGGTAATTGTCTGGCGGAAGGGCACTAGTGCTACATCTCCACTAGTGACCGCTGTGGCTCCTGGAGGGTCAACATACGGTCCTGGGTACGAGGGCAGAGTCAGTGTGGACAGATCCACCGGTGCTCTGCAGATCACACAGCTGACACTGGGAGACCAGGGACAGTGGAGCAAAGACAGGAAGCCCGTCCCCCTTAACGCCACCCTCTTCATAGACTACAGCACCCTGAGCCTCACCCCCCTGAGCCCCTCTGACACTAGAGACTACTAG
>TU119088
ACCGCTGTCAATCCACCAACACCATTACTGACAGTTACCTGGAGGAATGGCCCCAGTGATGCAGCTCCACTAGTAATCACTTCAGCTCCTGGAGGGTCAATATACGGTGACGGGTACAAGGGCAGAGTCAGTGTGGACAGATCCACCGGCGCTCTGCAGATCACACAGCTGACACTGGGAGACACGGGGACGTACGGTGTCAACATTATAACTAATGCAGGTGCCACTCTGACTGGACAGGTGGAGCTCAGGGTCTACAAGATGATCAATAGTGTCACAGTGCTCCCTGCTGGGGAGGTGCCAGTAGCAGGTGGGAACCTGACTCTGAAGTGCTAGGCCAATGCCCCTGTGGAGTCCAGACAGTGGAGCAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015099 True 624 mRNA 0.59 5 2140341 2146515
TU119088 False 373 lncRNA 0.55 2 2140436 2201333

Neighbor

gene id symbol gene type direction distance location
AMCG00015097 NA coding downstream 29663 2103760 ~ 2110678 (-)
AMCG00015093 grik5 coding downstream 88574 2030299 ~ 2051767 (-)
AMCG00015088 NA coding downstream 258640 1875910 ~ 1881701 (-)
AMCG00015078 osgep,LOC102796710 coding downstream 631819 1502438 ~ 1508522 (-)
AMCG00015072 NA coding downstream 667085 1460842 ~ 1473256 (-)
AMCG00015104 NA coding upstream 50257 2251590 ~ 2263117 (-)
AMCG00015110 NA coding upstream 191663 2392996 ~ 2393305 (-)
AMCG00015109 NA coding upstream 225613 2426946 ~ 2432937 (-)
AMCG00015106 NA coding upstream 236976 2438309 ~ 2438755 (-)
AMCG00015108 smg9 coding upstream 240223 2441556 ~ 2453425 (-)
G95469 NA non-coding downstream 10096 2128811 ~ 2130245 (-)
G95447 NA non-coding downstream 76737 2061212 ~ 2063604 (-)
G95437 NA non-coding downstream 115740 2021780 ~ 2024601 (-)
G95400 NA non-coding downstream 269456 1868219 ~ 1870885 (-)
G95335 NA non-coding downstream 342308 1797825 ~ 1798033 (-)
G95508 NA non-coding upstream 52104 2253437 ~ 2253730 (-)
G95511 NA non-coding upstream 61790 2263123 ~ 2263470 (-)
G95544 NA non-coding upstream 190236 2391569 ~ 2391872 (-)
G95605 NA non-coding upstream 431647 2632980 ~ 2633218 (-)
G95612 NA non-coding upstream 447126 2648459 ~ 2649573 (-)
G95472 NA other downstream 2889 2136420 ~ 2137452 (-)
AMCG00015098 gsk3a,gsk3ab,LOC106576382,LOC107551697,LOC107724158,LOC104943961 other downstream 47103 2080771 ~ 2093238 (-)
AMCG00015094 NA other downstream 62974 2066674 ~ 2077367 (-)
AMCG00015091 erf other downstream 160465 1963011 ~ 1979876 (-)
G95257 apex1,LOC107658891,LOC107579619,LOC107725930,LOC107656416 other downstream 623216 1510521 ~ 1517125 (-)
G95536 NA other upstream 149327 2350660 ~ 2351050 (-)
AMCG00015117 NA other upstream 459594 2660927 ~ 2670244 (-)
G95700 NA other upstream 612314 2813647 ~ 2816067 (-)
AMCG00015140 NA other upstream 672774 2874107 ~ 2878992 (-)
AMCG00015135 NA other upstream 686251 2887584 ~ 2891696 (-)

Expression


Co-expression Network