AMCG00015105


Basic Information

Item Value
gene id AMCG00015105
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2454008 ~ 2461387 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015105
AGACGAGACCAGGGAACTGGATACAGTAAATGCTGTTTGGTGTGAGTTTTACGAAAGAACAACAAGGTGGCGCTGGTTCGGACACGGCAGGAGGGGACAGCGGGTCCTACAGGGAGGAGATGAGCACACAGTCTCTGTTCTGATCACACTGGACTGTAGCAGGTTGCCATGGACGCTGTGTTCCAGGAGGTGATTGCCTTGGACATGCCTGTGGTGGCCGAGGAGACGGTGATGCAGGAGGGCGTGGGGGCAGAGGTGGAGCTCCAGGAGGATGCAGAGAATGGTGATCCTGAACTGGCGGTTATATCTGTCGGGCCAGGGGGAGAGGCTGCAGCGGTGCAAGGTGGACAAGAGAGCCTGTGCTGGGAGTGCGGACAGAGTTTCGACAGCCTGGACCTATTGGTGAGGCACTTCCGTACCCACCGCGCAAACACCGTCTGCAACCTGTGCTGCCTTACCTTCCGGCGCAATGTCTCACTGGTGCTCCACCTTGCCAATGTCCACTCCGGCCTGCCCCTCAGCTGCCAGTGTGGGGAGAGCTACCCCTCGGTGTGGGCCCTCAACCAGCACCTGAGTGTGCACCGGGGAGGGGGCGGGTCAGCGGGAGGAGGTCTGGGCACAGGGGCGGTGAGTGGTGGAAGAGGAGGGAATTCTGGGAAGGTGGCAAAGTGGGACAAGACACTTCTGTGCAGCTGCTACAGGGACCGCGTTGGGCGCAGCATTCGGGAACCCCCGATGGATGGACATCTTAACTCCTGCCCCTGGAGTCATAGAGACGCCcactcccccccctccccgacCCCATCTCCCTCTCACTCCCCCACCTCTTCTGCCAAGGCTCCCGCCCTCCTTAGTCACCATGCCAGCGGGGGAGACCACACCTACGGTAATGGGGACCGCAGAGAGGGTTGCGAAGCTACGGCGTCAGTCCAGGCGAAAAagagggtggaggaggagggggaggggttaggGAAGGTAggtgacagagagggggaggtgtTAAGGGAGGTAGGTGatggggaggaggagaagggggaagGGTTAGAGAGGGGTGGTGACAGAGAGGAGGCAAAGGGGGAAGGGTTAGAGATGGTAGGTGacagagaggagaaggaggtggAGGCGGGGTCAGGATTAGGAAGTGTAGGTGaaagagaggagaaggaggggttAGGGATTGTAGGTgaaaaagaggaggaggaggggttaGGGAGTATAGGTgaaagagaggaggaagaggggttAGGGAGTGTAGGtgaaagagaggaggaggaagaggaggggttAGGGAGTGCAGGTGAccgagaggaggaggaggaggaggaggaaaaggtggtgggggaggaggaggggttaGGGAGTGTAGCtgaaagagaggaggaggaggggttaGGGACTGTAGCtgaaagagaggaggaggaggggttaGGGAGTGTAGgggaaagagaggaggaggagaaggagggagtCTGGAGAGGAGGGGCGTTGGGTAAACCAGAAGCCCCAGCTGGGGATTTTATGGGGTTCCCTCCTTTGGAAGAAGACGAGGAAGACGATGTCAAGCCAGACCCCTCCAAGCTGGTGCCCCCGCTTCAtcctacccccacccccactgccCCCGCCACTGCTGCCCCAGGGGTGAAGGAGGAGCAGGCAGAGGCTGAGGCAGatgcagaggaggaggaggaggaggaggaggagcagagcaGTGAGGGGGGGGACACCCTGCCTCCCGGAGACTCAGACTTCTTCCCCACCCCTCCCCACCGCCGCCTCTCCAGGGCCTCAGATGGTGAGGGGCGCTCCTCCTCCTGCAGCAGTGGCAACTCCAGCGGCTCCTCCTACCGGCCCAAGAAGAGGCGGCGGCGGGTGCGGAAGGCGAGGGTTGGTCGACGGCCGTCAATGCAGACCCAGACGCCAGCCCTGCCACAATTTGACCTGCCGACACAAATGCAACCACAGACAGAATTACAATggcaaacaaagacacaaacacagccacCAGCCCCCAACCACgccaacaaaaacaacaacatcagcaaCAGCACCAAGGGTTCCAGGCATGCCTTCTGCCCCCACTGTGGCAAGGGCCCCTTCCAGACGGCCCGCACCCACATCCGCCATTCTGTCAACTGCCCCGAGCGTCACAAGGCCCAGTACACCTGTTCCAGCTGCCCCAGCGCCTTCGCCTCAGAGCTGGCCCTCCTGGCCCACCAGGCCCAGGTGCACCACAACCGCTCAGTGCGCATGTACGCCTGCGACTCGTGCCGAGAGGTGTTCCCAGACTATGTGGTGTTCAAACGCCACCACTGCCCCGGCAAAAGCAAACCGGACCCCACTCTGAACCCAACCACCACCGCTACTTAtacccccacaccccctctGACACCCGCTGTGGTGCACGTTCCCCCCCTGGGCTGCTCCCCCCTGCCGgcccccacctccacccccctctcccGGCCCCTCCAGCCCAACAGCAGTGCTAACCTTCTCCAGCCACCTTGCCCCCCTCCTGCCACACTGGTGACCTCCACCTCttgtgcccccccacccagctACACGCTCACTCCAGTTGTCGCCAACAACAACATCCTGGGCGCTGTCCGCCTGCCTcaccctgcccctgccccttcTGCTCCCCACACCACCACCATGGGGAGTCTCCCGCCTCCTCCTGCAACCACCTctgcccctccccctcctccatgCACTGCCCCCACCTACACCACCTCTAGTGCCCTCACCCAGGTGCACATTCCTACTAGGGCCCTCACTTCTACTTCCCAAATTCCCAGCACCACCAACCTTGTCCTCACCACCTCCACACTCACCCCTGTATCTACTACTGGTGTCCTCCAGACCACCTCCCCTGTGCCTGCCACCATTGGCCCAGGCCCACTACCCCCTGCCCTGTCCACTGTGCTGTCTATGTCCTCCCCTCTGCCTTGCCTGCCTCTCCCTGGAATGGTGCTACCCTCTACTGGAGCGATGGGCTCAGGGCCCCTAATGGCCACGCTGGTCATTACTCATGACTGCACTGGCACCAAAGTTCTCAGAGTGCTACTGCAGCCCCAGGGCTCCCAGCTGCAAACCGTAACTCAGGCCCAGACACAGGCCCTGgcccaaacacagacacaggctcAAACACAGATGCAGGCCCAGACACATGCCCTGTCCCTTGGCCAGATGCAGACACAGGCCCAGTCCCTTGGCCAgatgcagacacagacacgggCCCTGGCCCAGACACATGCCCTGTCCCTTGGCCAGATGCAGACACATGCTCTGGCCCTGGGCCAgatgcagacacagacacagacacaggcccTGACCCAGACACAGGCTCTGGCCCTGGgccagatacagacacacacacaggccctgGCCCTTGGCCAGATGCAGATGCAGATGCAGACACAGGCCCAGTCCCTGGGCCAGATACAGACACAGGCCCAGTCCCTTGGTCTGATACAGACACAGGCCCAGTCCCTTGGCCAGATACAGACACAGGCCCTGTCCCTGGGCCAGACACAGGCCTTGGGCCAAACACAGGCCCTGTCCCAGACCCTGACACAGATCCAGACAAAAACACAGGCACTGGCCCAGgaacagatacagacacacaccctgGCCAAGACACAAACCCTTGCCCAGACAGTGGCCTTAGCACAAACGCCAACCTCAGTCCTGACCCAGACACCAGCCAATCTCCCACTCCTGATCCAGACCCAGACCAAGATGTCAACCCCACTCCCAACCCAGAGCCAAATACCAGCCCCACTCTCCCTCCGGACCCAGATGCCAAACGccctcccccagcccccccccccacgcctCCAAACCCTCAACAAGACCCTGACAAATTCCCCCTTCCAGCTGCAAGCCCCACTCCTGCCTGTCTCATACCAGCCCCCCAGacccgccccccccccagcagCCCAAGAGCCCCTGAAAATCCTGGGCCTTTACGTCAACTGCAGCAAGGAAGTGATCCGGACAGCGGTAGAGGAGAGGAGGCGCCAGGCGCAGGAGGCATTGGGGAAGAAGGTGAAGTGGGTGTGGAGGTCATTGCCGCTTTGCCACGCCCCTGGCTTCCTTTGCCGTGAGTGTGGCGCGCGCTCCCTCCAGCCCTCACTGCCTGTGTTGCACCGCTACCTCCACAGGGGGCAGCGCCGCCACCGTTGCCAGTGTGGGCGGAGCTTCCTGCGGCGCCTCCACCTCCTGCGTCACCATTGGCTCCACGCCCAGGAGGTTTGGTACGTCTGTGCCCCCTGTGGGCGGAGCTTTGCCGGAGCGGCCAGACTTGCTCGGCACAAAGCAGCCCGGAAGAGGAGATTGGAGGAGGGAGGAGCACAGGAGAGAGTGGTGAAGAGGGGGGAGAGCCTGAAAGGGAAGGGGCACACAGAGAAGAGGGAAAGAGACGACAAGGCAAGTGGGGACAAGGAGGCGAACAAGAGGTGGAGCAGGGAGAAAGATGGGGACTGCCTGGGGTTGCGGCGTAGTGTTCGGGCAGTGGTGAGAGGGaacgaggaggaagaggaggaggaggagaagaagaagaagaggaggtgGCAGGTGTGTGCAGCCCCATTCACCTGTGTTTGCGGGAAGCCCTTCTGGAGGCCCAACTGCTTCCTCTGGCACCAGATCAGGAGCTGCAGCGGAAAGAGGCCGAATAGAGCTGGGCCGGCCCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015105 True 4698 mRNA 0.62 4 2454008 2461387

Neighbor

gene id symbol gene type direction distance location
AMCG00015101 NA coding upstream 166766 2276712 ~ 2287242 (+)
AMCG00015103 NA coding upstream 194179 2259196 ~ 2259829 (+)
AMCG00015100 NA coding upstream 201175 2251540 ~ 2252833 (+)
AMCG00015095 NA coding upstream 316724 2117020 ~ 2137284 (+)
AMCG00015090 NA coding upstream 513249 1932410 ~ 1940759 (+)
AMCG00015111 NA coding downstream 58937 2520324 ~ 2523197 (+)
AMCG00015115 NA coding downstream 159887 2621274 ~ 2634890 (+)
AMCG00015120 NA coding downstream 261222 2722609 ~ 2728315 (+)
AMCG00015128 NA coding downstream 391071 2852458 ~ 2857757 (+)
AMCG00015134 NA coding downstream 469991 2931378 ~ 2933831 (+)
G95534 NA non-coding upstream 102937 2350646 ~ 2351071 (+)
G95516 NA non-coding upstream 119488 2273294 ~ 2334520 (+)
G95514 NA non-coding upstream 185456 2268330 ~ 2268552 (+)
G95464 NA non-coding upstream 322115 2130738 ~ 2131893 (+)
G95415 NA non-coding upstream 373171 1990628 ~ 2080837 (+)
G95603 NA non-coding downstream 168280 2629667 ~ 2631659 (+)
G95617 NA non-coding downstream 195693 2657080 ~ 2657479 (+)
G95635 NA non-coding downstream 215085 2676472 ~ 2676725 (+)
G95652 NA non-coding downstream 235860 2697247 ~ 2697826 (+)
G95654 NA non-coding downstream 236660 2698047 ~ 2698695 (+)
AMCG00015102 NA other upstream 226057 2217200 ~ 2227951 (+)
G95486 NA other upstream 236906 2200937 ~ 2217102 (+)
AMCG00015096 NA other upstream 350154 2091675 ~ 2103854 (+)
AMCG00015092 NA other upstream 432152 1985985 ~ 2021856 (+)
AMCG00015081 LOC107701070 other upstream 857113 1582194 ~ 1596895 (+)
G95618 NA other downstream 196098 2657485 ~ 2658751 (+)
G95624 NA other downstream 203117 2664504 ~ 2666126 (+)
G95693 NA other downstream 345424 2806811 ~ 2808495 (+)
G95704 NA other downstream 359080 2820467 ~ 2830621 (+)
AMCG00015142 NA other downstream 503914 2965301 ~ 2971345 (+)

Expression


Co-expression Network