AMCG00015124


Basic Information

Item Value
gene id AMCG00015124
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2685759 ~ 2693630 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015124
ATGCTTATTGTAACACCTCAATGCGAAGCCCACCCTGATCTTCTGCCCCTGAAGaaggaagagcaggaggaagaggaggaggaggagggggaggaagagcaAGGAGAGCGAGCGGAACTGCAGGAGGGCAAGGCGCCTCTCAGATGccaggaaggagagagggaccAGGAGGACAGGGCAGAGGGAGACAAGGAGAGGTCGATggatggaggaggaagagaaagaggggagagggggggagagggcaGTCTTTGGCGATGCCGTGGCTGTCAGCGATGTTTCAGCTCTTCCTGGGAACTCACCGGTCACTGCTGCCAGGCTGGAGACTCCaacccttcctcctcctcccagcagTTCAGGTGTCCAGTGTGTGGTGACCACTTCCTGCGGCCCACGGCCTTCATCATGCACAGACGCAGCCACATGGGCCAGTCCAGCTACGCGTGTCCAGACTGCGGCCACACCTCCCCCTCCCTGGGCCACTTGGCCACCCATCGCCGTGCCCACTGTGGCGGCGGGTTTAGGAGCATGGGGGGGGGGCTGCGGAGACAGCTGTACAAGCGCCACTGGTgctgggaggaagaggaggaggaggaggagaaagaagggagggCCCGTCCCAGCTCCCCCATTCCCCCCCGGTCCCTGCAGTGTGCCCAGTGCTTCATGACATTCCGGGACGCAGAGACGAGCGAGAGGCACCTGCGCTTCAAGCACCCGGCCGAGTACGAGCGACTCCTTCGCGGCCGCACAGTGTTTGCCTGCCGCCGCTGCGACCGCACCTTCCCCTCCTCCGCCCAGCTCTCTGCCCACCAGCGCGCCCACGGCAACTGGAGCCTCACGCTTGCCTCCAGCTGCAGCCTGCTGCCCTCGCCATCATCGCCCCCTGCTGGCTCAGAGGACAAACTACACAGGGAAGCAGGGAGAGGTGACGGAGACTGGGAGAGGAGgcaggcggaggaggaggaggaggaggagggacagGAGAGGAccCCTGGCCTGCTCTCTGGTGCCCCCTGCCCCTCAGCCCTGGCTCTGCGCTGCCAGCAGTGTCACATCATCTTCAGTGACCACAGCACAAGGGACCGACACATGAGGGCCAAGCACCCAGCCACACCCCCCCAGCCTCCTCCGTTGGGACCCTCCCGCCACCCCCGGGGGCAGCCTCGCCCCCACTGCTGCCCCTGCTGTGGGGAGAGGTTCATACACCAGGACAGTCTGACACGGCactgcagagagacacactccgtgtgagagaaagacagggagggaggagggaggaggggcaGAGGTAGAAAGGTTTATGACTCCCTGACTCAACAGTACAGTGAcacaaaaggagagagagacaataaGAGGGAGAGGCGAAAGAAGCCGTTGTCGTGGACACTGTTTCCACGCACACTTCTGTGTGAGAATGGAGACTCCAGGACGAAGGGGACAAGGGGAGCAAATTTCATCAGCATGAGCCTCTGACCCACAGCACCGCGCCGCGCAGCACTGGGCAGTGGCACTGTCTTCAATTTCATTTCTGTTATCCCATCAACAGTGTGAATTATATTGTGCCTGCACCTTCTA

Function

GO:

id name namespace
GO:0031224 intrinsic component of membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015124 True 1578 mRNA 0.62 4 2685759 2693630

Neighbor

gene id symbol gene type direction distance location
AMCG00015125 LOC103478466 coding downstream 182 2675781 ~ 2685577 (-)
AMCG00015116 NA coding downstream 24860 2643523 ~ 2660899 (-)
AMCG00015119 NA coding downstream 44510 2639239 ~ 2641249 (-)
AMCG00015118 NA coding downstream 48338 2628687 ~ 2637421 (-)
AMCG00015112 NA coding downstream 104778 2578074 ~ 2580981 (-)
AMCG00015126 NA coding upstream 4630 2698260 ~ 2712770 (-)
AMCG00015123 LOC108273518,LOC103477911 coding upstream 24966 2718596 ~ 2720790 (-)
AMCG00015122 NA coding upstream 39156 2732786 ~ 2735205 (-)
AMCG00015121 NA coding upstream 45570 2739200 ~ 2742060 (-)
AMCG00015127 NA coding upstream 66367 2759997 ~ 2761704 (-)
G95637 NA non-coding downstream 8630 2676924 ~ 2677129 (-)
G95636 NA non-coding downstream 9080 2676439 ~ 2676679 (-)
G95612 NA non-coding downstream 36186 2648459 ~ 2649573 (-)
G95605 NA non-coding downstream 52541 2632980 ~ 2633218 (-)
G95544 NA non-coding downstream 293887 2391569 ~ 2391872 (-)
G95653 NA non-coding upstream 3622 2697252 ~ 2697823 (-)
G95675 NA non-coding upstream 48688 2742318 ~ 2742602 (-)
G95780 NA non-coding upstream 242664 2936294 ~ 2939095 (-)
G95778 NA non-coding upstream 249457 2943087 ~ 2945852 (-)
G95786 NA non-coding upstream 266705 2960335 ~ 2963345 (-)
AMCG00015117 NA other downstream 15515 2660927 ~ 2670244 (-)
G95536 NA other downstream 334709 2350660 ~ 2351050 (-)
AMCG00015099 NA other downstream 484426 2140341 ~ 2201333 (-)
G95472 NA other downstream 548307 2136420 ~ 2137452 (-)
AMCG00015098 gsk3a,gsk3ab,LOC106576382,LOC107551697,LOC107724158,LOC104943961 other downstream 592521 2080771 ~ 2093238 (-)
G95700 NA other upstream 120017 2813647 ~ 2816067 (-)
AMCG00015140 NA other upstream 180477 2874107 ~ 2878992 (-)
AMCG00015135 NA other upstream 193954 2887584 ~ 2891696 (-)
G95791 NA other upstream 284567 2978197 ~ 2980408 (-)
G95850 lipe other upstream 492539 3186169 ~ 3189093 (-)

Expression


Co-expression Network