AMCG00015127


Basic Information

Item Value
gene id AMCG00015127
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2759997 ~ 2761704 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015127
ATGGTGGTGACCATGAAGTTTGCCCTAGAGAAACAGCTTTTGAAGTATAAAGCAATGGAAAGCTTTCAGTTGGCCACATGCTTGGACTTACGCTTTAACATGGATTGGTTCTCCATTGATGAAGTGGAGAGCATGAGGAAACTGCTCTTCACAAAGGTCAAATGTCTTCTGAGGAGAACTCCAGACATTCCCAAAACCCCTCCACCTCATAAGTCACAGTCCAAGCTTTTCACATACATGACTGACCGTTCAAtGTGCGTTTCTCTCCCTGTTGATGCGCACTTCTCCCTGGGCAAGCTGCCCAAGCCCGACCCAGAGCTGGAGAAGAAGCAGATAGAGCTGCTGacagagctgctgcagaggctgGAGCCAGGGTTCAAGCTGCTAGAGGACACTCTGGAGCTCTACCTGACGCCTGTGACCGAGAGCCACCTGGGGCAGGAGGCCAGGAAACTGATGGAGAACCTGACCAAGCTGGGCGAAGACCTGTTAGCAGAGACTGGAGTCAGGGATTACATCTTGTAA

Function

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015127 True 525 mRNA 0.51 2 2759997 2761704

Neighbor

gene id symbol gene type direction distance location
AMCG00015121 NA coding downstream 17937 2739200 ~ 2742060 (-)
AMCG00015122 NA coding downstream 24792 2732786 ~ 2735205 (-)
AMCG00015123 LOC108273518,LOC103477911 coding downstream 39207 2718596 ~ 2720790 (-)
AMCG00015126 NA coding downstream 47227 2698260 ~ 2712770 (-)
AMCG00015124 NA coding downstream 66367 2685759 ~ 2693630 (-)
AMCG00015132 NA coding upstream 9963 2771667 ~ 2808716 (-)
AMCG00015131 NA coding upstream 58168 2819872 ~ 2824676 (-)
AMCG00015130 NA coding upstream 68882 2830586 ~ 2834416 (-)
AMCG00015129 NA coding upstream 75026 2836730 ~ 2844513 (-)
AMCG00015137 NA coding upstream 131619 2893323 ~ 2903632 (-)
G95675 NA non-coding downstream 17395 2742318 ~ 2742602 (-)
G95653 NA non-coding downstream 62174 2697252 ~ 2697823 (-)
G95637 NA non-coding downstream 82868 2676924 ~ 2677129 (-)
G95636 NA non-coding downstream 83318 2676439 ~ 2676679 (-)
G95612 NA non-coding downstream 110424 2648459 ~ 2649573 (-)
G95780 NA non-coding upstream 174590 2936294 ~ 2939095 (-)
G95778 NA non-coding upstream 181383 2943087 ~ 2945852 (-)
G95786 NA non-coding upstream 198631 2960335 ~ 2963345 (-)
G95798 NA non-coding upstream 231970 2993674 ~ 2994155 (-)
G95814 NA non-coding upstream 363727 3125431 ~ 3127592 (-)
AMCG00015117 NA other downstream 89753 2660927 ~ 2670244 (-)
G95536 NA other downstream 408947 2350660 ~ 2351050 (-)
AMCG00015099 NA other downstream 558664 2140341 ~ 2201333 (-)
G95472 NA other downstream 622545 2136420 ~ 2137452 (-)
AMCG00015098 gsk3a,gsk3ab,LOC106576382,LOC107551697,LOC107724158,LOC104943961 other downstream 666759 2080771 ~ 2093238 (-)
G95700 NA other upstream 51943 2813647 ~ 2816067 (-)
AMCG00015140 NA other upstream 112403 2874107 ~ 2878992 (-)
AMCG00015135 NA other upstream 125880 2887584 ~ 2891696 (-)
G95791 NA other upstream 216493 2978197 ~ 2980408 (-)
G95850 lipe other upstream 424465 3186169 ~ 3189093 (-)

Expression


Co-expression Network