AMCG00015130


Basic Information

Item Value
gene id AMCG00015130
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2830586 ~ 2834416 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015130
acagtaacactgactgactgactggacactacagtaacactgactgactgactggacactacagtatagtaacactgactgactgactggacactacagtacagtgtccTTAGAACTGATTCCTTTAGTAGGATAAAGAACATGAACCTATTCTTCACAGAGCCCTGATGGTACGAAACTCCCCTTTCTGTtgggaggagagaaggggagcaATAAACTGGTCACACAGGTTACGGCTGCCTACCACAGTCTGAAGGACAGAGAAGGACTTGCAGTGCTGTTTGTCAatcttaaatgtttattttgattgctttggcaatacacATATGTTTGTCATAATAAAGCAAATGGAAATAGAaagagagggtggggggtctATGTATGTAACTAAATCACACAATGAATGGATAATACAGTATAGGAGGCACAGTTTCCCACTGCACAGTGTATTAAAACACACTGCTATAGTGAGCAGTCTGTTATAGTACATACCAGTACAAGGATATTAGTTTATTAGAGAACAGAGTACGACATTGCAGCATAGTGTAGTATATTACTACAGTATATTGTGTGTTACAGTACAGAATACCGAGAGGTACTATACTatacacagtgcagtgcagtacagtgtggtataatgtgcagtgcaatacagtgtggtataatgtacagtactgtacagtacagagtGGTATGATGTATAGTGCAGTGAAGTACAGAGTGGTAAaaactacagtgcagtgcagtgtgggatAATGTACAGTACcatgcagtacagtgtagtataatgtacagtacagtgcagtacagtgtggtaTAATGTACAGTGCAGTGCCATGTATTACGAGGCGGTCAGAGAGCAGGTGAGCTCACAGGTGAGCTGACAGCACAGCAGGCAGCTGTGGACTTTGCACTCTGATCAGCAGCCTGAGCAGCTATATATACAgagcacaaagacacacaacacacactgacactgggaTACACCAAGAACTGCTCTCTGTCAAAAGTCTCTGAATTTCAGCCATGAAGGTGCTTGTGGTTCTTGTGCTGGCCATCTTCACAGGTTGCCATGCCAACATTCTGTGGCAGGACGAGCCCAAGTCAGGGCTGGATCAGGTGAGGGATGCATTCTGGGACTACGTTGCCAAGGCGACGCACACAGCTGAGGACACACTGCAGATGATCCGCAGCTCTGAGCTGGGCCAGGAAGTCAACACCAAGATCACAGACAGTGCCACGGCAGCCAACCAGTATGCGGTGGCCCTGCAGGGCCAGGTTGCCCCAATGGCACAGGAGCTGCTGCAGCGACTGACACAGGAGGCCGAGACCCTGCGCACCCGGCTGGGTGAGGACCTGTCCACAATCAGCTCCCAGCTAGCCCCCTACGCCGACAAGCTGGGAAACCGGGCCCGGGCTGGGGTTGAGGACCTGCGTCAGGGCCTGGCCCCTTATGCTGATGGCTTGCTGCCCGCCTCCCCCGAGGAGCTGCGACGTGTGCTGGCCGAGAAGAGCGAAGGGTTGCGTCAAGGCCTGGAGGCCGGCGCTGAGGATCTCAGGGCCCGCCTGGCACCCTACACCGAGCAGCTGCAGCAGAAGATTGACCAGCGTGTGCAGGACTTCCAGCAGCGTCTTGCCCCCCTTGCTGAAGGACTGCAGCAGCGTGCTGGAGAGGTAACTGAGAACCTGGCTCCCTACGCTGAGGACTTACGCGGCAAACTGGACCCCTATGCCCAGGACCTGCGCGCCCAGCTGGGCTCCCTGTGGGAAAAGTTCCAGCAGCGCTTCTGAGCAAAGAGACGCAAAGACATCCTtccttctccctcctccctctagtctcctcctctctcctcctctctcctcctctcttcttGTCTTCCTCCAAAACAAGACTGATCTCCTTTACCCCccaaaatctctctctccagagAAGAGTAAGCTATAAGATGCGTCTCTCTATCTGCCCAACCTTCCCTTCTGccctttttctctccctctaactgtactgtaactgtactgtaactgtaactattagcaacagaaatatattacCTGTGTGTATTTAGCTGAGATTCTCAATGAAATGTGTGTAGTAGTACTGTATTagtagagacagagagagtgtgaaCTGCTCtactatttgtgtttgtttgtttttgttttttcaataacaACCAGACAAAGGACGAGTGAATGCATTTCCCTCaaacaacccccctccccatgtGCCTGCGGCTGTATTTAAAGGTTGTGTGTGATGTTGCCTCTAAATGCCCTTGTAATTTATGCTGAATAAATCtggagtatttaaaaaataacaagagtACAtatctcttttatttttctgccttattatttgtttatattatctggcagctctctgtctctctctctctttttctatctttctctcattgctgcattttccttttccttcatctctctctgcctctctctccaccGAGAGTGGTGAGGGGCTGGAAGAAACTGTTGGATGGCCATGTGGATGAAGCATGCAGACTGCTGATACACTGCCTGTCTGACTGATttatacaattcaattaaaatgctttattgacatgactaa

Function

GO: NA

KEGG:

id description
K08760 APOA4; apolipoprotein A-IV

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015130 True 2587 mRNA 0.48 5 2830586 2834416

Neighbor

gene id symbol gene type direction distance location
AMCG00015131 NA coding downstream 5910 2819872 ~ 2824676 (-)
AMCG00015132 NA coding downstream 21870 2771667 ~ 2808716 (-)
AMCG00015127 NA coding downstream 68882 2759997 ~ 2761704 (-)
AMCG00015121 NA coding downstream 88526 2739200 ~ 2742060 (-)
AMCG00015122 NA coding downstream 95381 2732786 ~ 2735205 (-)
AMCG00015129 NA coding upstream 2314 2836730 ~ 2844513 (-)
AMCG00015137 NA coding upstream 58907 2893323 ~ 2903632 (-)
AMCG00015138 NA coding upstream 70649 2905065 ~ 2910414 (-)
AMCG00015139 NA coding upstream 81572 2915988 ~ 2922512 (-)
AMCG00015136 NA coding upstream 91069 2925485 ~ 2928277 (-)
G95675 NA non-coding downstream 87984 2742318 ~ 2742602 (-)
G95653 NA non-coding downstream 132763 2697252 ~ 2697823 (-)
G95637 NA non-coding downstream 153457 2676924 ~ 2677129 (-)
G95636 NA non-coding downstream 153907 2676439 ~ 2676679 (-)
G95612 NA non-coding downstream 181013 2648459 ~ 2649573 (-)
G95780 NA non-coding upstream 101878 2936294 ~ 2939095 (-)
G95778 NA non-coding upstream 108671 2943087 ~ 2945852 (-)
G95786 NA non-coding upstream 125919 2960335 ~ 2963345 (-)
G95798 NA non-coding upstream 159258 2993674 ~ 2994155 (-)
G95814 NA non-coding upstream 291015 3125431 ~ 3127592 (-)
G95700 NA other downstream 14519 2813647 ~ 2816067 (-)
AMCG00015117 NA other downstream 160342 2660927 ~ 2670244 (-)
G95536 NA other downstream 479536 2350660 ~ 2351050 (-)
AMCG00015099 NA other downstream 629253 2140341 ~ 2201333 (-)
G95472 NA other downstream 693134 2136420 ~ 2137452 (-)
AMCG00015140 NA other upstream 39691 2874107 ~ 2878992 (-)
AMCG00015135 NA other upstream 53168 2887584 ~ 2891696 (-)
G95791 NA other upstream 143781 2978197 ~ 2980408 (-)
G95850 lipe other upstream 351753 3186169 ~ 3189093 (-)
G95854 NA other upstream 362005 3196421 ~ 3197189 (-)

Expression


Co-expression Network