AMCG00015131


Basic Information

Item Value
gene id AMCG00015131
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2819872 ~ 2824676 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015131
ATGGGAGGGTGCCAGGCTCGCTCAGTGCCAGCAGAACCCCAAGATGGGCCAGTGCCGCAGTGGGAGGTGGCTCTGGAGCGGTTCTGGCAGTACGTGTCCGAGCTGAACAACCAGGCTGACGGTGTGGTGACCCGCATCAAGACCTCCCAGCTCAGCAAAGAACTGGACGGCCTGATCACAGACACCATGGCAGATCTCAGTGAGTACGGGGAGGACCTGCAGACCCGCCTGGCCCCCTACGCCCAGGACACCGCCGGCCGCTTCGCCCACGACTTCACGCTTGTGAGCAGCAAGCTGCGGGCAGACCTGGAGGATGCCCGGCAGCGTGCCACCCAGTACAGCGAGGAGCTGCGCACTATGGTGGAGCAGAACACGCAGGATGTGCAGAACCGGGTCAACCTGTACACCCGTAAGCTCCGCAAGCGCCTGAGCAAAGACACCGAGGAGATCCGCAGGAAAGTGTCCACTTACCTGCAGGAGCTGCAGTCCCGCACGCAGATGAACATGGATGCAGTGAGAGACCGTCTGGAGCCCTACGCCAGCGGCCTGCGTGACCGCGCCACTAACCGCCTGGTCGCCGTGCAGGGCCTGCTCAGCCAGCAGGGCCAGAGTCTGCGCGAGAGGGTGGAGAGCCAATCGGAGGACCTGAGGCAGCAGATGGAGCAGACGGCAGAGGGTCTGCGCAGCTCACTGGAGGGGAAGCTGGATGAGCTGCGCAGCTGGCTGCAGCCCTACACCCAGGAGCTGCAGCAGAAGCTGCAGGAGGCCATAGACAAGCTGAAGGGAGATGATAGTGcttagacagagagagagggatagggaggagagaaagagggagagatggtGACTGCTTTAGTTAACTGTGTTTCtgtatatctatctgtctgtatgtatgcacacaaacatgtacatgcacgcacgcacacacacacacacacacataaacacgcacacatacacttCACCACCCATTAAACTCTAACCTGCTCTCTCATGCACagtgagaggggagagagagagacaaggacagagggagggaggtggacACCACTCCTTACAaactctgcctgtctgtctgtctgtctgtcctgccACCTATGCAGACCCATGCCATACTACCCCGCTCTGTAGTACGCTGTCATTGCTAGGTCGGGTGTTCAGGTGGCATGGAGCGAGACAGGGCTCACTCAGACAGCTGTGTCACTGTTACTGACTGCCTGCCTGCTGGACTGTAAAcgctgtgaaggaaaaaaaaaaaaaaataaagcaacttTCAACATTCCTGAGATTGTGTAGTGATTAGAAGTTTTCAGTATTctcaacactgcactgcactacaccatatactgcactacactttAATATATTGCACTAGACTATAATAATTGCACTAgactataatatactacactagactataatatactacactaaACTctaatatactgcactgcactataatGTTCTGCACTAGACTCTaatatactgcactacactataatATACTGCACTGGACTATAATATACTGCATTAGACCCTAATATATTACACTACTctataatatactacactacactataatatactgcactacactacagtgcagtataatattCTGCactacattataatatattgcactAGACCAGGGATCGGCAACGTTTTTGGTCAGAGTGACAAACATTCTGAAATATGTACTTCTTAAGTTGTTGGCATGTGGGGGAGTGAGGGGGGAGAGATAATTATTAAGGTTTCCATCTACATATTTCCTGTCTATGTAATTATCACAGTGCAATAAAAGTAcacttaaaataagttaaacttatacaattaaaataaattacattgaacaataaaatacaaacattattttgcta

Function

GO:

id name namespace
GO:0006810 transport biological_process

KEGG:

id description
K04524 APOE; apolipoprotein E

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015131 True 1877 mRNA 0.50 4 2819872 2824676

Neighbor

gene id symbol gene type direction distance location
AMCG00015132 NA coding downstream 11156 2771667 ~ 2808716 (-)
AMCG00015127 NA coding downstream 58168 2759997 ~ 2761704 (-)
AMCG00015121 NA coding downstream 77812 2739200 ~ 2742060 (-)
AMCG00015122 NA coding downstream 84667 2732786 ~ 2735205 (-)
AMCG00015123 LOC108273518,LOC103477911 coding downstream 99082 2718596 ~ 2720790 (-)
AMCG00015130 NA coding upstream 5910 2830586 ~ 2834416 (-)
AMCG00015129 NA coding upstream 12054 2836730 ~ 2844513 (-)
AMCG00015137 NA coding upstream 68647 2893323 ~ 2903632 (-)
AMCG00015138 NA coding upstream 80389 2905065 ~ 2910414 (-)
AMCG00015139 NA coding upstream 91312 2915988 ~ 2922512 (-)
G95675 NA non-coding downstream 77270 2742318 ~ 2742602 (-)
G95653 NA non-coding downstream 122049 2697252 ~ 2697823 (-)
G95637 NA non-coding downstream 142743 2676924 ~ 2677129 (-)
G95636 NA non-coding downstream 143193 2676439 ~ 2676679 (-)
G95612 NA non-coding downstream 170299 2648459 ~ 2649573 (-)
G95780 NA non-coding upstream 111618 2936294 ~ 2939095 (-)
G95778 NA non-coding upstream 118411 2943087 ~ 2945852 (-)
G95786 NA non-coding upstream 135659 2960335 ~ 2963345 (-)
G95798 NA non-coding upstream 168998 2993674 ~ 2994155 (-)
G95814 NA non-coding upstream 300755 3125431 ~ 3127592 (-)
G95700 NA other downstream 3805 2813647 ~ 2816067 (-)
AMCG00015117 NA other downstream 149628 2660927 ~ 2670244 (-)
G95536 NA other downstream 468822 2350660 ~ 2351050 (-)
AMCG00015099 NA other downstream 618539 2140341 ~ 2201333 (-)
G95472 NA other downstream 682420 2136420 ~ 2137452 (-)
AMCG00015140 NA other upstream 49431 2874107 ~ 2878992 (-)
AMCG00015135 NA other upstream 62908 2887584 ~ 2891696 (-)
G95791 NA other upstream 153521 2978197 ~ 2980408 (-)
G95850 lipe other upstream 361493 3186169 ~ 3189093 (-)
G95854 NA other upstream 371745 3196421 ~ 3197189 (-)

Expression


Co-expression Network