AMCG00015134


Basic Information

Item Value
gene id AMCG00015134
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2931378 ~ 2933831 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015134
ATGGACTACCCCCTGAACATGAATGGCTACCCTGGGGTCTACTCCCCCCAGGCCCTGCTAGATTATACCAACTACGGGGACTCAGCAGGGGGGGGTGGGGCCTTCATCTGCACAGAATGCGGCGAAGGCTTCTCCCACTACCCCGACCTCCAGAGTCACATGACCCTGCATGGCACTACCGAACCCACCCCCTTCCACTACGCCGGCTTTGGCTACCCAGGGGAGGCAACGGTGGCAGGTGCGGGGGTCCAGTCCGCTCAGGGAAACCAGGACTTCAGTGTGGCAGGCGGGTACGGCGGCCCGATCCAGTTCACCTTGCAGGAAAACGGCACCCTGACTGTAGTGGAGGCTTCAGGGGAATTCGACACCTATGGCACCACCGCCACCGCTGCCCACCAGGCAGACTCCCATGCTTGGGGGCAGGCTGGGCGGACGTCTCGTGCCACTCAGACCCAGGAGTCGCCCACTGCTCAGCTGGTGCCGCCGCCGCCAAAATCCCACACAGAGAATGGACCAGGCCCCCCTCGGAACAGCGccgcccctcccccaccccGTTTCCGGTGCCAGACCTGCGGCCGCTGCTTCAACACGAGGCCTGGCCTGCAGCGTCACCGCCGCTACCGGACCTCGGAGCGCGGTCACAAGTGTGCCCTGTGTTGCCGGTCCTTTGGGGAGCGGACAGAGCTGCGGGCCCACCTACATGCCCATGCCAACCAGCACTCCTATGGCTGTGGCCGCTGCGGCAAGCGCTTCCCCAGCCTGGAGGCCCTGGAAGCCCACCGGCAGAGCCAGcatggaggaggggagggggcgGTGCAGGAGGTGGAGTCCGGAGCAGTgaggggggcaggggcaggggctgACAACTGCCCTGAGTGGTACTACCCTTGCCAGGAGTGCAGCCTGCGTTTCTTCTGGCTGTCAGACCTCCAGAGCCACCGCCACAGGCACCATGCCACCGCCACTGCCCGGCACATCCCTGGCCCCGGACACAGACCCCCAGCATTCCGCCAGAGACAGGAGGATGAGGAGGTAGAGGAGTTAGTGGAGGAGGAGGCGAGAGGTACCCCGACAGTTCCCGAAACCAACCGCCCATTAACACCCCCCAAGCCGACCTCCAAACTCTCCCTGCCACCTCACACACGGCTACAAACCTTTCACCCCTATCGCCCTCCTACACAGCCTCCCCCAGTCCTGAAGCCCTATTGCTGTGGTCTGTGTGGCCGGCGCTTCCAGTTGGTGTCTGAGCTGAAGAGGCACCACTCTGTACACCTGGGGCCTGGGCGGCGGCGCGGATATGGCCCCCCGAGCGTGGGAGTCGGTGGTGGCAGTTTTGTTCTCGGCGGGGGCGTGTTTCGAGAGagggggcgggggagggggcGAGGgaaaggcagagggagagaagggagcggagggaggggaagggggcgAGGGATGGGGACGGGGACGGGgccaggggtcaggggtcaccaGGCCCGTACCTTCCCCTGCAAGTACTGTGGCCGCACCTTCCTGCACTCTAGCAGCCTTTCCAGACACACGCGCTTCCACACGGGGGACAAGCTGAACCACTGTGGAGTCTGTGGCAAGAGCTTCATCCAGCTGTGCGACCTGGAGCGGCATAGCCACACCCATGGCCCCAGGAGGACGGACACTGACAAagtagagagggagagggagagctggCTCTCTTGCCCAGGTTGTGGGGAGTCATTTCTTGGAGATGCCGGCTTGCGGGAGCACAGGTGCCTCGTCAACGGCCTCCCACCCCCCCTGCCCTTGCCCCCTGCTCCCATCCCTCTCACTGCTCCCGACCTGCCTCCCtctgtccccctcccccactccaCTCATGCTCTCTCAgccccccttcctctctcctcctcctcctcctccacatcctccctccccctctccacgGGTCCCACTCACTCCTCCCTCCGCACCACCTGCCctaacccctccccctctcccattCCCTCCCCCTCACCACGCGTCATCTTCCGCTGCTCGGTGTGTGGCAAGGGCTTTGGCCTGCTGAGCGTCTACCAGCGCCACCAGCGCTACCACTACCGGGAGAGCGGCACGTACCCGTGTGCCCAGTGTCCCCGCACCTTCCGCCAGCCTTCCGCCCTGCACCGCCACCTGGCCTCCCATAGCTGCCGCTCCCCCCGAGCCCCAGGGGGCCAGGATGCTGCCCTCCCCAGCACTGTCGCGACCACCATCAAGGCCAGAGCTGCTTCGGATACAGCACCCATCCCACTCTctattcctcctcctccacatgAAATTGAGTTGgcagcagaggaggaggaggaagaggaggaggggaaggaggaggaggataaGGCTCCGTCTCAAGTGCTGTACGAATGCACCGAGTGTCACCAGACCTTCACCTGCCTGGGGACGTTCCTGCAACACCAGAGTGTGCACGAGAGTGAGGCAAGGCTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015134 True 2454 mRNA 0.65 1 2931378 2933831

Neighbor

gene id symbol gene type direction distance location
AMCG00015128 NA coding upstream 73621 2852458 ~ 2857757 (+)
AMCG00015120 NA coding upstream 203063 2722609 ~ 2728315 (+)
AMCG00015115 NA coding upstream 296488 2621274 ~ 2634890 (+)
AMCG00015111 NA coding upstream 408181 2520324 ~ 2523197 (+)
AMCG00015105 NA coding upstream 469991 2454008 ~ 2461387 (+)
AMCG00015133 NA coding downstream 18912 2952743 ~ 2962840 (+)
AMCG00015141 NA coding downstream 42555 2976386 ~ 2984926 (+)
AMCG00015143 LOC108431067 coding downstream 54824 2988655 ~ 3000677 (+)
AMCG00015147 LOC105024308,LOC107379671,LOC104967681,LOC101483472 coding downstream 150537 3084368 ~ 3089951 (+)
AMCG00015146 NA coding downstream 172020 3105851 ~ 3119976 (+)
G95706 NA non-coding upstream 98617 2831750 ~ 2832761 (+)
G95692 NA non-coding upstream 115164 2813701 ~ 2816214 (+)
G95686 NA non-coding upstream 152234 2778936 ~ 2779144 (+)
G95672 NA non-coding upstream 180548 2745474 ~ 2750830 (+)
G95669 NA non-coding upstream 189128 2739888 ~ 2742250 (+)
G95740 NA non-coding downstream 5093 2938924 ~ 2939121 (+)
G95742 NA non-coding downstream 8826 2942657 ~ 2942901 (+)
G95753 NA non-coding downstream 59843 2993674 ~ 2994171 (+)
G95828 NA non-coding downstream 308357 3242188 ~ 3244332 (+)
G95839 NA non-coding downstream 316485 3250316 ~ 3250524 (+)
G95704 NA other upstream 100757 2820467 ~ 2830621 (+)
G95693 NA other upstream 122883 2806811 ~ 2808495 (+)
G95624 NA other upstream 265252 2664504 ~ 2666126 (+)
G95618 NA other upstream 272627 2657485 ~ 2658751 (+)
AMCG00015102 NA other upstream 703427 2217200 ~ 2227951 (+)
AMCG00015142 NA other downstream 31470 2965301 ~ 2971345 (+)
G95955 NA other downstream 708109 3641940 ~ 3642200 (+)
AMCG00015170 NA other downstream 969868 3903699 ~ 3916734 (+)
AMCG00015173 NA other downstream 1000085 3933916 ~ 3949420 (+)
G95992 NA other downstream 1035998 3969829 ~ 3971683 (+)

Expression


Co-expression Network