AMCG00015136


Basic Information

Item Value
gene id AMCG00015136
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2925485 ~ 2928277 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015136
ATGGCTTTCGCTTTTTATTTGACTCCCATTGTCGCTCTGAACGTTCAACCCGTGCCCCATGCACCTCCGGCGGCCGAGACTGGGGATTCTCCTGGGTTGTGCCGCGGGGGGCTGCTGAAGAaggaggtggtggaggaggaaatGGAGTTGGTGCAGATTAAAACAGAGGAGGGAGAGACTGTGAGACTTGGGAgGAAGTCATGGGCTGTGTGGGAGCAGGATGATGTGGTGGCGCTGATCGCTGCGTGGGGGCAGGCAGGGGTGCAGCGCGATCTCCGCCAGACGATCAGAAACATCCGCGTGTTCGAGCGCATCGCTGCGGAGCTACGGCGCAAGGGCCTGGAGCGCAGCGCTGTGCAGTGCCGCCTGAAGATCAAGAAGCTCAAGTCGGAGTACAATAGGGTCCAGAAGAGCGGCGCCAACCCGAAGACCTTCCGCCACTACCAGCAGCTCCACCGCATCCTTGCCCAGTCTGAGGAGGAGCTGGGACCAGCACCGGCTCCCCAGGCAGACGGGGACTGTGCCCCAGACGTAGAGGGGGATGCAGTGCCCAGCCACGGCCTGCACAACGACGTGCAAACCCATGGCAATACGCAAGCGCTCGCACAGACCAGGTTTCTGCCAGACGCAAGTCCGAGCGGGGTAGAGGGGTCGGGGGTCACGAAGCATTCGCGTGTGGAGGAGTGTAGTGGGGGGGCTGTGGGTCTCCCCCCAGCGGAACCTGCAAGCACAGCCAGCGCTGGTGTTGCCTTGGTTACTGTCCCCCTGGTCAACTCCCTCTCAGATTCCCCACCCAGGCCCTATCGAAAGCGGCGCCGGTGCAGCCCGGCCCGCTGCTCCCTGACGGACCTGCTGGAGTACCTGCGGGAGGCGGACCAACGCCTGTTGTCCCTGCAGGCCCAGTTCATCGAGTCAGAGAGACGTGAGCGCCAGCTGGACCGGGCCGCTGCCACCCAGAACCAGGAGATGCTGTGCGGCCTGCTGAATCGCCTGTTGGAGGCCTGCACCCACTGCACCCGCTGTGGCACCAGCACCGGGATGCCTGGGACTGGACCAGGAAACTCAGGACCAGACAAGAATGCACAACAAACAGCAGCACAGGATATAGGGCTGGACTGATACTGGGCTGGGCTTACCTTAACTGAGTTGGGTTGTGCTGGACTGAGCCTGGGTTGGGCATGCTGGCACTGGACTAGAGACTACAGCAATACTACACAACACTACTCTACTGCTTCAGTAACACTGTCTGGGAAAGCAGACGCAAACACAGACAGCGAGAGAGAAACGGGAGTGATAAATGTTGTGAGAGAGATGCTtgaatacagagagagagaatgaaaaatgtgaacttgtgttggctttgttttttttttattttgttttgtcatgttCATAATCAAATCTCAAATGGgtcaataaacattttattaaaata

Function

GO:

id name namespace
GO:0006259 DNA metabolic process biological_process
GO:0043226 organelle cellular_component
GO:0043229 intracellular organelle cellular_component

KEGG:

id description
ko03460 Fanconi anemia pathway
ko04110 Cell cycle
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015136 True 1435 mRNA 0.58 4 2925485 2928277

Neighbor

gene id symbol gene type direction distance location
AMCG00015139 NA coding downstream 2973 2915988 ~ 2922512 (-)
AMCG00015138 NA coding downstream 15071 2905065 ~ 2910414 (-)
AMCG00015137 NA coding downstream 21853 2893323 ~ 2903632 (-)
AMCG00015129 NA coding downstream 80972 2836730 ~ 2844513 (-)
AMCG00015130 NA coding downstream 91069 2830586 ~ 2834416 (-)
AMCG00015144 NA coding upstream 72539 3000816 ~ 3008611 (-)
AMCG00015154 NA coding upstream 307228 3235505 ~ 3239525 (-)
AMCG00015153 LOC103393952,LOC100707815,LOC108229619,LOC101472794,LOC105916922,LOC105910646,LOC103360126 coding upstream 313833 3242110 ~ 3247588 (-)
AMCG00015152 NA coding upstream 322704 3250981 ~ 3268761 (-)
AMCG00015158 NA coding upstream 375480 3303757 ~ 3313326 (-)
G95675 NA non-coding downstream 182883 2742318 ~ 2742602 (-)
G95653 NA non-coding downstream 227662 2697252 ~ 2697823 (-)
G95637 NA non-coding downstream 248356 2676924 ~ 2677129 (-)
G95636 NA non-coding downstream 248806 2676439 ~ 2676679 (-)
G95612 NA non-coding downstream 275912 2648459 ~ 2649573 (-)
G95780 NA non-coding upstream 8017 2936294 ~ 2939095 (-)
G95778 NA non-coding upstream 14810 2943087 ~ 2945852 (-)
G95786 NA non-coding upstream 32058 2960335 ~ 2963345 (-)
G95798 NA non-coding upstream 65397 2993674 ~ 2994155 (-)
G95814 NA non-coding upstream 197154 3125431 ~ 3127592 (-)
AMCG00015135 NA other downstream 33789 2887584 ~ 2891696 (-)
AMCG00015140 NA other downstream 46493 2874107 ~ 2878992 (-)
G95700 NA other downstream 109418 2813647 ~ 2816067 (-)
AMCG00015117 NA other downstream 255241 2660927 ~ 2670244 (-)
G95536 NA other downstream 574435 2350660 ~ 2351050 (-)
G95791 NA other upstream 49920 2978197 ~ 2980408 (-)
G95850 lipe other upstream 257892 3186169 ~ 3189093 (-)
G95854 NA other upstream 268144 3196421 ~ 3197189 (-)
G95921 NA other upstream 421602 3349879 ~ 3350442 (-)
AMCG00015164 NA other upstream 675406 3603683 ~ 3607192 (-)

Expression


Co-expression Network