AMCG00015137


Basic Information

Item Value
gene id AMCG00015137
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2893323 ~ 2903632 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015137
CCCGCTCCGCCCACAGAGCCCGCTCCGCCCACAGAGCCCGCTCCGGCCACGCAGCCCGCTCCGCCCACAGAGCCCGCGCCGACCAAGCAGCCCTCTCCACCTACAGAACCCCCGCCGGCCAAGCAGCCCTCACCAGCCACAGAGCCCATGCCTGCCTCGCAGCCCTCACCAGCCACTCAGCGCTCACCACCAGCCAGTGGGAGGATGCTGGAGCAGGAAGAGCTGAGAGAAGAGCTGAAAATACTGCAGGGGGAAGAGCgaggggagaggcaggaggagggcACAATGCTGGGTGAGGGGCTGGAGGACCAGAGAGAGCAGGAGCAATTGCAAGATGGGGGGTGTCCGGTTGGACTACAGAGTGGCTTACAGTTGCACCAGGCAGCAGGAAGCTCGAGACTGGGCCAGCTGCGGGGCAAAGGGAGCCTGGAGAAGGAGCAGCTGCCAGGTCAAGGATTGGAGCAGACGCAGAGCTCACCCCTTGAGGTTGAGAGCTCCCAGCTAGAGCAGCCACATATGGGCCTgagcccagagctggagcagcaaTGGAGCCCCCAGTTGGATGACAAGGGGAGTCTGGACCAACCACAGCAACATGCCTTGCAAGAGGACCCAAAGCAGCACAGCTCACCCCAGGACCAGCAGCAGCCACCCCAGCAGCCATGGCAACAGTGCAGTGTGCAGCTGGACAGGCCAGCACAATTCTCCCCAGTTCTCTCTGCGCTAGAGGCCCCTCCTACACAGCAGCCTCACCCACTCCCGTCTCCCCAGAGACCCCCCCAGAGCCGTCAGAATGCAAACCCTCAAGCATGCACACAGCAAACCCGTTGCCTGGAGCTGGGGAAAGAGGAGGCCCCGCTACCCCCTCCGTCCTCCTCATCTTCCTCTGCCTCTTCCTCTGCTCATTCAGCCCCCCGCCCTGCACAACGGGGAAGGAAGCGCCGGGTAGGGGTGCTGTGTCGCCCCACGCCTGCTAAGCGGCAGGGACTGGGATGCGAGGAGTGTGGTCAGAGGTTCGAGGGGACGATTGGGCTGAGAGGAcatagagagagggagcacagacagggagagggggagggtatgacggaggaggaggagagaatgGTTGAGGGAGAGGGTGATGAGGAGAGAATTAGAGCGGGGCAGAAGGAACGAATGGGAGAGGTGAAGGAGGACCGTATGCGAGAAAAAGCGGCAGAGAAGAAGAGCACAGGGAAGGGAGCAGGAAGGAAGAGGAAAGGACAGGgaaagaagagaggagagggacagaaagagagtttgggaaagagaaagggagatgGCATGAGGGAAGTGGCAGGGAGGGAGGAGCAGGATTTGCgagctccccccaccccaacacatTGTCCAGCAAGGAATGCCACAGGTAGAACCCGAAGTTCTCCACGGAACCCCCCACCGACCAATCCCACCCCTTTTCCCCGTGCAGACTCGTCTCCAAGGGGCAGGGGCCGGAGAGGGGCGGGTTCAAGGACGTCACTGCAGGCCGTCCCCCACCACCAGGAGAAGGAGGGATCGAGAGGACTAGAGAGGGAGACGCCACCTGTACCTCCATCCCAGCTTCTCGATCCCAGTTTGCATCTGCCTCTGATTTCCACTGcgacagaggaagaggaggatgctGGCATGAGGAAGAGGACATCGacaaagaggaggaagaggaggaggaatcCACCTCCACAGCCCGAGGAGGAGGTGGAAGAATCCCAGGCTTTGGTGAGGAGATCGGTCGGAATGTCGCAGGATTCAAGAGTCCGGGAATGGAGACTAGGactggaggaggaagaagagaaggagaaagaagaagaagaagaggaggaggaggaggaggaggaggaagacgagTTTGGACAACCAGGGTTTAAGAGGAGggcagtgggagagagggaggtgggagAGGAGGGGCAGAGGGCAATGGAAGAAGGGGATATTTTTCCACGTGTGGATGACTCTCCGCCTCCTCCCCCTCTTGCCCTCTCAAACCAGGGCCAGAGCAGTATTGGAACCAGAACTCCGGGTTCAGAGGGGGCGGCACAGAATGGACCTGTGGCACAGCCTAGGGATCACTCTGCTCCTGAGCGAGGAGAAAGGGAGGAACCGGCACTGACACTGAAacagcctcctcctccctcctctgcctccctcgctctcctcctcctgcctcaCCCTGGacaagaggagggagagaaggaacgAGAGATCAAGCAGGAGCTTCTGGACCAGGTAGCCGCTGGACAACAGCACCAACAGCCCAGTGGGGACCAACCGAGTCCAGTTGACATGGCTGTCCAGAACCAGACAACTCAACCTGGATGCTGGCTTCAAGAAGAGGACGAAGAAGCAGGAGAGACTGCACTGAGTGGGCTGGGCCAAGCAGGGCCCCAGAACCTGAGCCAGGGGGGTCCAGAGACTGGTCCATTTCCCACAGGGACAGGCACTGGTTGTACTGGGCCATGGAGGTCAAAGGGCACACAAGAGCGAGAGACTGAGACCGGGCAGACAGGGGCCATCAaactggaggaagaggaggtgcaagtgggggaggaggagaggtggAGGAAAGGGAAGAGGATGCAGGGGGAACAGGCTGAAGGAGGGGGAGgaaaggaaggaggaggagttgGAGTGCTGAGGGGGAACGAGGGACGgcaggggcagagagagggggaggatgAGGATGGGGTGAGAATGGGGCAGGTGGGCGCTGGGGGGCTCCTGTTCAGATTGGAGTCACCGATGGAAACCTGCGGTAtaaaggaggaggagatgggggAAGGGGTAGAGCTGGGAGCATTTTTCCAGACTTCCACTGCTGTCATAGAGGGTCTGACATTGCATCTACACccgggagagggaggaggaggaagaggagcatTGTCTTCCTCTCTGGAGGAGGAGTGTCCTGAGGAGCAGATTGTCTTTGAACTGGAAGCCATGACCACCACTGTGGAGGTGCTGAAGTcagaggaaggagagggggaggaggacaAGGCACAGGCAGTAGGGgacggaggaggagggagggtgTCCCATTCCTCCGTCTTGCTGGAGGGCTTCTTCCCGCCGGCGGTGGCGCTgggtggaggagaggagagtgggGTTGAGAGGATGGGCAATGATGGGGACTGTGAGACAGAGTCCCTGAGTTTTAGGGAACAGTCTGTGGTCCCTGGGCAGCTCAGTCTGATGGAATCTCTGGGGGGCCGAGTGATCAAAGTGGAGGAGGTCCCACCCGAGGCAGAGGAGGGTGCCCCCCCTAGCCAGGTGAGGGAAAGTGGAGAGGGGGGGCCGGAGGAGGCTGTGGATGGCGGGGTGTGTGTATTCTTGGTGAAGGAGGAGGACCCCTTGGTGTTGGACGAACCCCAATTTCTGCACCACATCCAGACTGATCAGGAGACACAAGGGCCAGATTCAGTCAAGCTCCCGGAGAGGGGAAAcagggcaggaggaggaggagtgagagaggggCCCTGTGAACAAGGCATGTTCCCCCtggtgaaggaggaggagagagaggtggaggtACAGCGAGAGAGCACGCCTGGGGTGatCTCAGGGCAGACTTGGCCACAGATGGAAGAGGAACTAGAGCACAGCGGCCAACAAGAGCCTGAGCCACGATCCACACCACTGCCTGCCCCTCACCCTGCCCCTCACCCTGCCCCTCACCCTGCCCTCACACAGCCCAATGAGGAGAGGGGTGCTGGGGAGCTCGTGATGGAGGgaagtgagagggagagagagggactgacacagagagagtcACTCAGAGTCAACTCTCATTTCCACAGAGAGAGCggtaGCCCACAAAACCTTCCAGAGCACCTGGGTTCCGCTCTAGAATGTGGCGGGGATTTAGAAGGCTGTGAGTCCGAGCCGGAGGAGGAAGCGGTTGCCATGGCGCATTTCTATGTgaaaaaggaggaagaggaggaggactgGGATGGAGTCGGGGCCCCCCCCGCAGATGAGCTGAGCTGGCCTGGGGTCCGAGAGCATCGTTGGAGCAGAGACAGGgtcagtgtgtgggggggacgCTCTCCCTTGCAGTGTTTCTCTCACTTCCTGGACTTGGGGGTGTGGGAGGGTGTGGCCCGCTGCAGCTACATCCAGCCGGTCCCCTCAGCCAATGAGGTCGCCAGGCTGttcCCTAGCTCCAGACTGTACTGGCAGAGCTCTACCCGTGTACCCCTGATCGCCGACGCCCTGTCAGACACCCGCTACCGCCAGCTGATGAGGGGCCTGAGACTGACACAGGAGAGACTGGGGACAGAGGCGGGCTCCCGCAGCGAGGGTGGACTGGGGCCGGTGGTGGCCAGGGTGTGCCAGGGGTGCAGGGAGCTGCCCAGGGAGAGGCGATGTGCGGTGGCAGAGCTCGCAGTGCCCCTGGGGAGGAAGGAGAGCCAATATCGGAACATTGTCCTGGTGGGGGCCAGCGGGAGAATCCTGGACTTCTGGAtccaagaggaggaggaggaggaggaagaggaggagagaaggggtATGGCCTGGGTGATCTCCAAGGTGACAGAGACCCTGCAGGGCCAGGGGGAGGGTAGGGCCTGTGTGTTCCTGTGTGGGCGGGGCTACGCCTCAGCCCCCGTGCTGGACCGCCTCCTCCTGTCCGGAGTGTACGGCACAAGCTGGGCAGAGGtaggaaggagggagggggaggaggaggagagggagaccaGATGGGAGGAGCTGGTGAGAGCAGATGGGAGGATGGTGCTGGTGCGGAATGAGAGAGGGGCATACCTGTCCACCTTTGTGGGTGGGGGCGGGGAGGAAGCGCCAGAGGGGGGTGTTGATGGTGTCCCGGAAGTTTGTCGGCAGTACCGGGCCTCCACTCGGGGCGCTGGGCTGACCCGCCGGCTCCTGGGCCTGTACCGGACCCCGGGGAGTTGTGCTAGACCTTCAGACCCCACCCAGGCGGTTCTGTGGCACTTGGTGGATTTGGCTCTGGTGAACAGCTGGCTCCTATACAATGAAGGCCACACCGGCTCTGAGCATGACGACAGGGTCTCCAGGATCAGCCTCATGACGTTCAGACTGATGGTGGCTCAGGCACTGGTGGGGGGAGAAGGGGAGGCTGAGGAGGGGCAGGGAGCCTCGCCCCCCCCGCCATTGTTGCCgccgccgcctcctcctcctcgctctTCATCTcagtctcctcctcctcctgctgctcctATCCTCTCCCAGGCCCCCAGCCAACCCTCTGTCTCTTCCCCCTCCCTGGCTGCACGGTTCGATGGGCAGGGACATTGGCCGGAGCAGGGGGAACCCAGACACCCCTCCCCCTGTCATCGTAATGGCTGTGGCCGCCTGTGCAGCGTGCTCTGCCTCAAGTGCCACGTCTTCCTGTGCATCACCCATGGCAACAACTGCTTCTACAAATTCCACAGCCTGACC

Function

GO:

id name namespace
GO:0006974 cellular response to DNA damage stimulus biological_process
GO:0006281 DNA repair biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015137 True 5433 mRNA 0.62 9 2893323 2903632

Neighbor

gene id symbol gene type direction distance location
AMCG00015129 NA coding downstream 48810 2836730 ~ 2844513 (-)
AMCG00015130 NA coding downstream 58907 2830586 ~ 2834416 (-)
AMCG00015131 NA coding downstream 68647 2819872 ~ 2824676 (-)
AMCG00015132 NA coding downstream 84607 2771667 ~ 2808716 (-)
AMCG00015127 NA coding downstream 131619 2759997 ~ 2761704 (-)
AMCG00015138 NA coding upstream 1433 2905065 ~ 2910414 (-)
AMCG00015139 NA coding upstream 12356 2915988 ~ 2922512 (-)
AMCG00015136 NA coding upstream 21853 2925485 ~ 2928277 (-)
AMCG00015144 NA coding upstream 97184 3000816 ~ 3008611 (-)
AMCG00015154 NA coding upstream 331873 3235505 ~ 3239525 (-)
G95675 NA non-coding downstream 150721 2742318 ~ 2742602 (-)
G95653 NA non-coding downstream 195500 2697252 ~ 2697823 (-)
G95637 NA non-coding downstream 216194 2676924 ~ 2677129 (-)
G95636 NA non-coding downstream 216644 2676439 ~ 2676679 (-)
G95612 NA non-coding downstream 243750 2648459 ~ 2649573 (-)
G95780 NA non-coding upstream 32662 2936294 ~ 2939095 (-)
G95778 NA non-coding upstream 39455 2943087 ~ 2945852 (-)
G95786 NA non-coding upstream 56703 2960335 ~ 2963345 (-)
G95798 NA non-coding upstream 90042 2993674 ~ 2994155 (-)
G95814 NA non-coding upstream 221799 3125431 ~ 3127592 (-)
AMCG00015135 NA other downstream 1627 2887584 ~ 2891696 (-)
AMCG00015140 NA other downstream 14331 2874107 ~ 2878992 (-)
G95700 NA other downstream 77256 2813647 ~ 2816067 (-)
AMCG00015117 NA other downstream 223079 2660927 ~ 2670244 (-)
G95536 NA other downstream 542273 2350660 ~ 2351050 (-)
G95791 NA other upstream 74565 2978197 ~ 2980408 (-)
G95850 lipe other upstream 282537 3186169 ~ 3189093 (-)
G95854 NA other upstream 292789 3196421 ~ 3197189 (-)
G95921 NA other upstream 446247 3349879 ~ 3350442 (-)
AMCG00015164 NA other upstream 700051 3603683 ~ 3607192 (-)

Expression


Co-expression Network