AMCG00015138


Basic Information

Item Value
gene id AMCG00015138
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2905065 ~ 2910414 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015138
atgggGGCAGGCACGGTCTCCTCCTCAGCAGCCTTTTCATGTGTTGCTGAGGAGAGACAGCGGATGTGTGCCTGGTTGCCGGGGCTGAAGCCATCCCCAGCAACGGAGGGGGACATTCCGCCCTCTCTGCCATCTGCGGGGGACCTCCTGCCACTCCCACCTCCGCCCTCTGAGGTGGAACTCCGGCCGCTTTTGCCTCAGCAGCCTGAGGAGGCTGACTTTCCGGAGCTCGAGAGGGAAGTCAGCCTGCTGCTGCCGCCACCCGGTGATGCCGCGCCCGCACCGCCTGAGGAAGccagcctgctgctgctgccgcctcCCGGGGATGACGCGCCCACACCGCCCAGGGTTGccagcctgctgctgctgctgccacccGGGGACGAAGAACCAGTGTCGTGGCTGCTACTGTGCCCTGAGGGGGCACCACCACTGCCAGGGAGATTTATCTCACCCGGAGAGTGTTCGGACCTCCCTTTGTGTTCCAATGCGACGCTGGTGGTGGGAGGGAAAGAGAGTGGACCATCACAGCACAGCGCACGCAGaaataCTCCACTGGAGCTACAATCGAATCAACCCCTCCCCTTCAGGGAGCGGTGGGAGGAGTTAGTTGCTATGGAGACGGAGGCTCCACCAATCAGCCAGGAGAAGGCTGGCAGCCCTGCTGTAGGGGGCGGGGCCATGGACATGGACACAAAGGGGCTGGAGTCTGGCAGCCTTAAAGGGCCAGTCCAGAGTAAGCGCCACCCGGCGGAGTACGAGGCGGCGGTGCTGGGCGACGCACTGTTCGCCTGCTATGTGTGCGACCGGCCCTTCCCATCCTCCCGCGAGCTGCTGGCTCACCAGCGCGCTCACACGGACCGTACGCCCTTCCGCTGCCCCGTGTGTGGCGCTGCCTTCCCCCGCTCCTCTGAGCTCACCCTGCACAAGCGGGCACACTTTGGCCAGGCTGGCTATGCCTGCGCTGACTGCGGCAAAGCCTGCAAGACGCTGACCCTGCTTCGCTACCACCGACGCACCCACACCGGCGAGCGGCCCTACTGCTGCCCCCGCTGCCCCCGCCGCTTTAGCCAGTCCTCGGGTCTCCACCGCCACCTGCTCACCCATGcccaggaggaggaggagggGCGCCCACAGTGCTACCGCAGCAACAACTGGAACTGCAAACACAACAACTCCAGCAAAAGTCTCCCGAACCTCAGCTACACAAAGAGCCCCTGGGATTGGAGGCACAAGCGCTGTATGAACCACAACAACATGACCTGCAGCTTCAACTTCAGCCACAAGAAGCCCTGGAACTGCAACCACCGCAACAACAACTAG

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome
ko03018 RNA degradation

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015138 True 1323 mRNA 0.64 5 2905065 2910414

Neighbor

gene id symbol gene type direction distance location
AMCG00015137 NA coding downstream 1433 2893323 ~ 2903632 (-)
AMCG00015129 NA coding downstream 60552 2836730 ~ 2844513 (-)
AMCG00015130 NA coding downstream 70649 2830586 ~ 2834416 (-)
AMCG00015131 NA coding downstream 80389 2819872 ~ 2824676 (-)
AMCG00015132 NA coding downstream 96349 2771667 ~ 2808716 (-)
AMCG00015139 NA coding upstream 5574 2915988 ~ 2922512 (-)
AMCG00015136 NA coding upstream 15071 2925485 ~ 2928277 (-)
AMCG00015144 NA coding upstream 90402 3000816 ~ 3008611 (-)
AMCG00015154 NA coding upstream 325091 3235505 ~ 3239525 (-)
AMCG00015153 LOC103393952,LOC100707815,LOC108229619,LOC101472794,LOC105916922,LOC105910646,LOC103360126 coding upstream 331696 3242110 ~ 3247588 (-)
G95675 NA non-coding downstream 162463 2742318 ~ 2742602 (-)
G95653 NA non-coding downstream 207242 2697252 ~ 2697823 (-)
G95637 NA non-coding downstream 227936 2676924 ~ 2677129 (-)
G95636 NA non-coding downstream 228386 2676439 ~ 2676679 (-)
G95612 NA non-coding downstream 255492 2648459 ~ 2649573 (-)
G95780 NA non-coding upstream 25880 2936294 ~ 2939095 (-)
G95778 NA non-coding upstream 32673 2943087 ~ 2945852 (-)
G95786 NA non-coding upstream 49921 2960335 ~ 2963345 (-)
G95798 NA non-coding upstream 83260 2993674 ~ 2994155 (-)
G95814 NA non-coding upstream 215017 3125431 ~ 3127592 (-)
AMCG00015135 NA other downstream 13369 2887584 ~ 2891696 (-)
AMCG00015140 NA other downstream 26073 2874107 ~ 2878992 (-)
G95700 NA other downstream 88998 2813647 ~ 2816067 (-)
AMCG00015117 NA other downstream 234821 2660927 ~ 2670244 (-)
G95536 NA other downstream 554015 2350660 ~ 2351050 (-)
G95791 NA other upstream 67783 2978197 ~ 2980408 (-)
G95850 lipe other upstream 275755 3186169 ~ 3189093 (-)
G95854 NA other upstream 286007 3196421 ~ 3197189 (-)
G95921 NA other upstream 439465 3349879 ~ 3350442 (-)
AMCG00015164 NA other upstream 693269 3603683 ~ 3607192 (-)

Expression


Co-expression Network