AMCG00015140


Basic Information

Item Value
gene id AMCG00015140
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 2874107 ~ 2878992 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015140
ATGAACGAGGGCTGTCAGCGGCACCTATTGGACGCAGGGGGACCTGTGTGCAGGGCCAGGCTGAAGGAAGACAACAGCAACCCCCTGAGGATATTGCGGAATCACCCTGGTGACAATCACTGCGACCATGACCGAGGAGGTGGTGGCAGCTGGTTCAAAATGACGATGAGTAGAGCAGAGCAGTACCTGGCGTCCCGGAATATCAAGGTGATTCTGAACAGGACGTGCGGCATGCAGGACATCAATGACATCATCGAGGAGAACATCCCTGAGCTCCTCTCTCTGAACCTCAGCAACAACAGACTCTACAAACTGGACGAAGTCTCTGAGCTGGTGAGAAAAGTGCCCAACCTGAAGATCCTCAACCTTTCCCACAACGAGgaTGGTCATGTCCTCCCCAGACTGATAACATTTGAGATTGACTCCCCAACCACACTCCTGGCCTGCAAGggCAGTTCTTCTGTGTCTGAGAAAGTGAAAAGAGTGATTCAGCGCTTCCTGCAGCACCTCGTGGTTCCACCTGCAGAGCAAACCTGCCAGGGCGTGGTGGCCCTGCTGAGTGAGCTGCCAAGGACCCCAGCTCCTTTGTGGTGGACGTCAACACCTGCACTaatAAGATACTGTCCTTCACCGTCAGTGGAGTGTTTAAAGAAGGTGAGTGGGGTGGGGCTGGACAtgaaCAAGAAGTCTAGAGACTCAGTGCGCATGTTCTCCCGCACGTTCATCAATGCAGCAAACTCTGGGCTCTGTATTGTGAACGATGAGCTGTTTGTGCGGAATGCGAAGCCGGAGATGATCAGATGGGCGTTCGCTGCGTCGACCCCCATGCCACCTAGCAGCTTCCTGCCCAGACTGACCGCTAAGCAGCAAAAGATGCTGTCCATCTTATCCACGCGATCCCGCATGAACCTGGAGTAG
>TU119422
AAGCAGCAAAAGATGCTGTCCATCTTATCCACGCGATCCCGCATGAACCTGGAGTAGTCACAGAAGTGTCTACAGGATAATGCGTGGAATTTCAACAGAGCCTCACAGATCTTCACCCAGCTACGgCTCAAAGGAAGATCCCAGATGTGGCTTTCAAGTGAAGAGGGTGTGagagtgatggagagagagagacagatgcgATGATATCTCTGCAGTGAAGATCCCCTTTATGAAGACCCTCTCTCTTTTGATCCCTTTTCCCTGCTTTGATACTCCCACAGAAGCCCCACTGCACCCCGGCCCCTCAGtgggtctctgtgtgtatattaCCCTCGGCAGTCTGTATTGTGTTAAGTTGGCTGCACTAAACATAGCAGTGTccccacacaaaaaaacagaaatataggACACAGGAAGGAGCAGTACACAAAAAGAATAACTGGGGGCCAGAACTGTCACAGAGAggtacatgtaaaataatgtttcaaagTAGCAAAGTAGCAAAGTGAAAATGGCAGTGGAGGGCAGCAGGCTTTTCCACTACAATAACAATGACGGATCAGTCTATTACAAACCTTCCCTTACCAACTATGAAACCAAATATTTTGTGGGTGGAGAATCAATAAGAGCTTATGCAAACAAATCAGTGGTAATAGAATAAGGAGACGTACATATCCAAGACAAACCCCACCGGGatggaaacattattttacatgtaccTCTCTGTGACAGTTCTGGCCCACAGATAGGAAGGAGCAGTACATGCAAAGAATAACTTGtgtcctatatatttttttcacatttgaaacaCTTGATTTGATCATATATTACTAGTTGTTTAGTGCAGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015140 True 918 mRNA 0.54 10 2875186 2878992
TU119422 False 850 lncRNA 0.43 3 2874107 2875242

Neighbor

gene id symbol gene type direction distance location
AMCG00015129 NA coding downstream 29594 2836730 ~ 2844513 (-)
AMCG00015130 NA coding downstream 39691 2830586 ~ 2834416 (-)
AMCG00015131 NA coding downstream 49431 2819872 ~ 2824676 (-)
AMCG00015132 NA coding downstream 65391 2771667 ~ 2808716 (-)
AMCG00015127 NA coding downstream 112403 2759997 ~ 2761704 (-)
AMCG00015137 NA coding upstream 14331 2893323 ~ 2903632 (-)
AMCG00015138 NA coding upstream 26073 2905065 ~ 2910414 (-)
AMCG00015139 NA coding upstream 36996 2915988 ~ 2922512 (-)
AMCG00015136 NA coding upstream 46493 2925485 ~ 2928277 (-)
AMCG00015144 NA coding upstream 121824 3000816 ~ 3008611 (-)
G95675 NA non-coding downstream 131505 2742318 ~ 2742602 (-)
G95653 NA non-coding downstream 176284 2697252 ~ 2697823 (-)
G95637 NA non-coding downstream 196978 2676924 ~ 2677129 (-)
G95636 NA non-coding downstream 197428 2676439 ~ 2676679 (-)
G95612 NA non-coding downstream 224534 2648459 ~ 2649573 (-)
G95780 NA non-coding upstream 57302 2936294 ~ 2939095 (-)
G95778 NA non-coding upstream 64095 2943087 ~ 2945852 (-)
G95786 NA non-coding upstream 81343 2960335 ~ 2963345 (-)
G95798 NA non-coding upstream 114682 2993674 ~ 2994155 (-)
G95814 NA non-coding upstream 246439 3125431 ~ 3127592 (-)
G95700 NA other downstream 58040 2813647 ~ 2816067 (-)
AMCG00015117 NA other downstream 203863 2660927 ~ 2670244 (-)
G95536 NA other downstream 523057 2350660 ~ 2351050 (-)
AMCG00015099 NA other downstream 672774 2140341 ~ 2201333 (-)
G95472 NA other downstream 736655 2136420 ~ 2137452 (-)
AMCG00015135 NA other upstream 8592 2887584 ~ 2891696 (-)
G95791 NA other upstream 99205 2978197 ~ 2980408 (-)
G95850 lipe other upstream 307177 3186169 ~ 3189093 (-)
G95854 NA other upstream 317429 3196421 ~ 3197189 (-)
G95921 NA other upstream 470887 3349879 ~ 3350442 (-)

Expression


Co-expression Network