AMCG00015154


Basic Information

Item Value
gene id AMCG00015154
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3235505 ~ 3239525 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015154
GCAGAACCGTCCTCTGACTGGAAAACAGCGTGAGTGGAACACGAGCAGCCACTGTGTCCCAGTCTACCTGCAATCCCTCTGCACATCTCTtccctcccatctctctcttttcatttgccccctccccctcttctctccccccttacctctttctctgtgttagtgtgtcagtgtttgggTGGCTATGGGCAATGTTTTGGCCGCAGgggctccccctccccctccccctccccccgcccCTCCCCTGGGCAGCGTCCCCGCTCCCTCCCCAGGACTCATGTCAGTGCCTCCGGGGTTCAGCATGCCTTCCATGACCCCCTCCTTGGGCACTGCTGGTGCCGGGCAGGAGGGTGGCGAGAGTGAGGGAGCACTGCCCAATCCAGGGTCGTTTGAGGAGTGTCACCGCAAGTGCAAAGAGATTTTCCCAGTGCAGATGGAGGGAGTCAAGTTAGTTGTCAACAAGGGACTGAGCAATCACTTCCAGGCATTCCCAGTGATGGTGGGTGACATGGATAACAGTGGCAGTCTGAACGCTCAGGTGATTCACCAGCTCAGCACCCGGCTTCGCTCCAAACTGGCCTTCCAGACTCAGCAGGCGAAGTTTGTGAACTGGCAAGGCGATTTGGAGTTCCGTGGAGAAGACTTCACTGCTGCCGTCACCATCGGCAACCCTGACGTCCTCACTGGATCAGGTATAGTGGTGGCTCACTATCTACAGAGCATCACCCCCTCTCTCGCCCTGGGGGGGGAGCTGGTGTACCACCGTCGGCCAGGGGAGGAGGGCACAGTGATGTCACTGGCCGGCAAATACACAGGCAGTAATTTTGTGGCGACTATGACACTAGGGGGCGCTGGAGCACACGCATCCTATTACCACAAAGCCAACGACCAGctgcagGTGGGGGTGGAGCTGGAAGCCAGTTCCAGGATGCAGGAGACCAGCGTGTCGTTCGGGTACCAGCTGGACCTGCCCAAGGCCAACCTGCTCTTTAAAGgcTCGGTGGACAGTAACTGGGTCGTTGGGGCCACACTGGAGAAGAAGCTGCCGCCACTGCCCCTGTCTCTGGCCATGGGGGCGTTCCTCAACCACCGCAAGAACAAGTTTCATCTGGGCCACTCTGCACAGGCCGCTCACGCCGAGCAGTGA

Function

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005741 mitochondrial outer membrane cellular_component

KEGG:

id description
K11518 TOM40; mitochondrial import receptor subunit TOM40

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015154 True 1147 mRNA 0.59 10 3235505 3239525

Neighbor

gene id symbol gene type direction distance location
AMCG00015144 NA coding downstream 226894 3000816 ~ 3008611 (-)
AMCG00015136 NA coding downstream 307228 2925485 ~ 2928277 (-)
AMCG00015139 NA coding downstream 312993 2915988 ~ 2922512 (-)
AMCG00015138 NA coding downstream 325091 2905065 ~ 2910414 (-)
AMCG00015137 NA coding downstream 331873 2893323 ~ 2903632 (-)
AMCG00015153 LOC103393952,LOC100707815,LOC108229619,LOC101472794,LOC105916922,LOC105910646,LOC103360126 coding upstream 2585 3242110 ~ 3247588 (-)
AMCG00015152 NA coding upstream 11456 3250981 ~ 3268761 (-)
AMCG00015158 NA coding upstream 64232 3303757 ~ 3313326 (-)
AMCG00015157 LOC103472502,LOC104927561,LOC103358743,LOC103394163,LOC108240267,LOC102201254 coding upstream 104849 3344374 ~ 3347587 (-)
AMCG00015156 NA coding upstream 112093 3351618 ~ 3358905 (-)
G95814 NA non-coding downstream 107913 3125431 ~ 3127592 (-)
G95798 NA non-coding downstream 241350 2993674 ~ 2994155 (-)
G95786 NA non-coding downstream 272160 2960335 ~ 2963345 (-)
G95778 NA non-coding downstream 289653 2943087 ~ 2945852 (-)
G95780 NA non-coding downstream 296410 2936294 ~ 2939095 (-)
G95933 NA non-coding upstream 232682 3472207 ~ 3472926 (-)
G95960 NA non-coding upstream 363079 3602604 ~ 3603677 (-)
G95957 LOC100846954 non-coding upstream 378248 3617773 ~ 3618298 (-)
G95968 NA non-coding upstream 490474 3729999 ~ 3730319 (-)
G95978 NA non-coding upstream 631551 3871076 ~ 3871334 (-)
G95854 NA other downstream 38316 3196421 ~ 3197189 (-)
G95850 lipe other downstream 46412 3186169 ~ 3189093 (-)
G95791 NA other downstream 255097 2978197 ~ 2980408 (-)
AMCG00015135 NA other downstream 343809 2887584 ~ 2891696 (-)
AMCG00015140 NA other downstream 356513 2874107 ~ 2878992 (-)
G95921 NA other upstream 110354 3349879 ~ 3350442 (-)
AMCG00015164 NA other upstream 364158 3603683 ~ 3607192 (-)
AMCG00015180 NA other upstream 870794 4110319 ~ 4123963 (-)
G96094 NA other upstream 935354 4174879 ~ 4180441 (-)
G96191 NA other upstream 1378186 4617711 ~ 4619264 (-)

Expression


Co-expression Network