AMCG00015156


Basic Information

Item Value
gene id AMCG00015156
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3351618 ~ 3358905 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015156
atgaactTGTGCGGCCAGGCAGTGCAGGCTGAGAATGTGACTGTGAAGGAGGGTGGCACGGCGGAGATCAACTGCAAACTGCACAACTACGATGGATCCATCGTCGTCATCCAGAACCCCCGCAGACAGACACTGTTCTTCAATGGGACCagagttcccCCAGAGGTGCCCCAGGTGCTGGTGCAGTCGCAGGCAGTGGAGGGGGGGGAGGTGGAGCTCACCTGCCTGTCTCCCCGCAGCAAACCCCCTGCCTCCCTGCACTGGTACAGAGACCGCCGGGAGATCCCAGgagttTCCAGTCAGCAGGACAGTGGTCAGACGGTCAGTGTATCGTCAACAGTCCGTTTCATTGTGTCCCGACGGGACCACAAGGCAGCCCTGACCTGTGAGGCCTCGCATCCAAGCCTGGGTTCACAACGCAGGGTTGCCCACTACATCTCACCCACGGTGCGGATCATTCCCCCACCGGGAGTCCTGCGCGAGGGCGACCCCCTCTCCCTGACTTGCTCAGTCACCGGCAACCCCCTgccgcACAGTGTGGAGTGGTCACGGGTGAACGACTCCCTGCCAGAGAGGGCAGAGACCAAGGGGACAGTGCTCTGGGTGCCACGCCTTAGTGCTGCTCACAATGGCTCCTACCTCTGCCAGGCCAGCAACCAGTATGGTCGCGCGGCAGACATATACACACTGGTGGTGTATGACCCGGGGGCGGTGGTGGAGGCCCACAGTGCAGTGCCCTATGCGGTGGTGGGAGGAGTGCTGGCGCTGCTGGTCTTCTCGGTGGTGTGTGTCCTCATCGTCACCATCTGGTGTTCCGTCCGACAgaaagGCTCCTATCTGACTCATGAGGCCAGCGGGCTGGACGAGCACGGAGAGGTGCAGGAGGCCTTTCTGAACGGGGGCGAAGGTCGCGAGGGCAAGAAGGAGTACCTGCTGTAGCGCCACCAGCTCGCTCCCCTGGCagcccccttcctctctctctctccctcgtcCCCTTGTGGTAGACCTCCAGAACTGCAACCTGCTACTGCGAGCTGAAGCCAAGCCAACAACCAGACCAacacaccgactgactgacCGACCGAAGAGACTGATAACAATCACAGCAACTccaacactgagagagagggagagaaagagacagagagagagagagagggaaggaggtgaagagagagatggggagagggtggagagaggaagagatgtAAGGTTCAACCATATCAGTAATAACTTTCGGGAGCGAGAGTGagttggagagagagatagagaaagggagagagattgaGGTGCTGGaagggagagacagaataaGAGAGATatggagagtgagagagagagagagggagcagaagggggagagagaaggaattCACAACCAAATCAGAAATTATATTTAGATAAGAGGGATGGGAAGAGAGTGGGAGGGGGGATTGATGGggagaaggaaacaaaaaatgtatactcAGGCACTTAAAACTtcactcagagagagagaggcagagagaaggaagggatgaagagagagaggaagggaggggttGGGGTTTAGGTGACAGAGAGATTAAAGCAAATTGGAATTTAATTGATaaagagatagagaaagagtgtcctcccttcctctctctctctctctctctctctctgtcccttgTCCTGTTGTGTCTGTTAATGACTAACAGACTCTgtcacctcctctctctctctccctctctccctctctctctccctatccctCTCAATTTAATCCAATTCAAGTCGATTCAAGAAAGCTATATTGGCAATGAcaaagtctctctctcagtctttcTCTCTCGCACATGGGAAGTACGGGCTACGGGAATGCCAGACTGGAAGAACgacaaaaacaatatacaatttaaaaaaaagatgcgAATGACGTAAACGAACGAATACGCAACTCCTTACAGCTCCTTCCCGCCAGGTCTGTTGAGACATACAAGATGAACgacacaggagagaaagaaaaaaaaaacgagactCAAAGTTTCGCATTAAATGTGTGCAGCCGGCCGCAGAAGACGACAGAAATGTTGAGATTcacagtatatacacatatcTCGAAAATGTAACtctttgtattaaaatgatcTTTTAAACTCCTAACAGCGCTAGGATCATCGTTAGactagaattaaaataaagattaaaaacgCAGATCTGTGTATGTGCGCATAAACACCATTTCATTCTGActgtaaccttttttttattattattattattattattatcattattttcaaaagattaCAGTTCTTGTTAatattcttgttgttgttgttattattattattattattattgttattatcattattgttattattcttgttaCTGTTATGATTActatcattgttattgttaatactTGTTCGGTTTTTCATgtctcatttttttattattctgtaaaaAGTTTCtttgagtgtctgtctgtccctgtgtgtgtgtgtctgacagtgtgtgtgtcaccccctctgtgtgtgtctatgcgtgtgtatgtgtgtgtatgactctctctctctgtgtttgtgtctgtccctctctctgtctctatgtgtgtctgtatgtctgtgtgtgggtgaggGGGGTCTGTCtatctctgtatgtgtgtctctatctctctctctccttctgatTGTGTCTGTAGGTCTCCcctcctgtgtctgtgtgagcgcgtgtgtctctgtccccGTGTGTCTCcatgtctctctgtgttcatgttgttgttttagctAACTCTTCTT

Function

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0005515 protein binding molecular_function

KEGG:

id description
K06783 CADM4, IGSF4C, TSLL2; cell adhesion molecule 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015156 True 2768 mRNA 0.49 8 3351618 3358905

Neighbor

gene id symbol gene type direction distance location
AMCG00015157 LOC103472502,LOC104927561,LOC103358743,LOC103394163,LOC108240267,LOC102201254 coding downstream 4031 3344374 ~ 3347587 (-)
AMCG00015158 NA coding downstream 38292 3303757 ~ 3313326 (-)
AMCG00015152 NA coding downstream 82857 3250981 ~ 3268761 (-)
AMCG00015153 LOC103393952,LOC100707815,LOC108229619,LOC101472794,LOC105916922,LOC105910646,LOC103360126 coding downstream 104030 3242110 ~ 3247588 (-)
AMCG00015154 NA coding downstream 112093 3235505 ~ 3239525 (-)
AMCG00015160 NA coding upstream 35982 3394887 ~ 3398152 (-)
AMCG00015159 NA coding upstream 44569 3403474 ~ 3407541 (-)
AMCG00015161 NA coding upstream 49684 3408589 ~ 3414202 (-)
AMCG00015163 megf8,LOC104957441,LOC106633547,LOC102782412,LOC106605571 coding upstream 57947 3416852 ~ 3464811 (-)
AMCG00015169 NA coding upstream 457041 3815946 ~ 3825037 (-)
G95814 NA non-coding downstream 224026 3125431 ~ 3127592 (-)
G95798 NA non-coding downstream 357463 2993674 ~ 2994155 (-)
G95786 NA non-coding downstream 388273 2960335 ~ 2963345 (-)
G95778 NA non-coding downstream 405766 2943087 ~ 2945852 (-)
G95780 NA non-coding downstream 412523 2936294 ~ 2939095 (-)
G95933 NA non-coding upstream 113302 3472207 ~ 3472926 (-)
G95960 NA non-coding upstream 243699 3602604 ~ 3603677 (-)
G95957 LOC100846954 non-coding upstream 258868 3617773 ~ 3618298 (-)
G95968 NA non-coding upstream 371094 3729999 ~ 3730319 (-)
G95978 NA non-coding upstream 512171 3871076 ~ 3871334 (-)
G95921 NA other downstream 1176 3349879 ~ 3350442 (-)
G95854 NA other downstream 154429 3196421 ~ 3197189 (-)
G95850 lipe other downstream 162525 3186169 ~ 3189093 (-)
G95791 NA other downstream 371210 2978197 ~ 2980408 (-)
AMCG00015135 NA other downstream 459922 2887584 ~ 2891696 (-)
AMCG00015164 NA other upstream 244778 3603683 ~ 3607192 (-)
AMCG00015180 NA other upstream 751414 4110319 ~ 4123963 (-)
G96094 NA other upstream 815974 4174879 ~ 4180441 (-)
G96191 NA other upstream 1258806 4617711 ~ 4619264 (-)
AMCG00015203 NA other upstream 1419488 4778393 ~ 4802904 (-)

Expression


Co-expression Network