AMCG00015159


Basic Information

Item Value
gene id AMCG00015159
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3403474 ~ 3407541 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015159
GCGCCTCTTTCAGAgagaaatacagtaataataaaaatagtatggctggtgagagcgggggggggtgTGAGGGGATGGGTCGTGTCTGTGGGTTCGTGTTGTAGTCAGTAAGTTTTGAATCAAGAGGAAGAGGTAACACTAAATATAATATCATCGACGAGACTGTTCTgggcctgtctctctctctctcactatttCTTTCTCTCCGTCTGTCCCCCACGCACTTAAGTTTGGGAGAttgtttggggaggggggggtgatTACCTTTGGAGgcgttattttttttaattctttcatattttgctttttaattttttttgagCCGACATAAAAAAGGGCagtgagaaaacaacaaactcCAGTCACCCAACTAAAGACtcatgtattcatttcaaatgGACAAAGATCGCTTCTTCCAGTCCGCTGTGACCAGGGGCCCATGCTCCTGGCTGGAGATGCACCAGTTCATTGGTGACCTGATGGCGTCCAGCTCGGCTGCCGTGCCTGTGAAGGACTGCAGCCAGCAGGAGGCGCTTCGCTCAGCCTGGGAGAGCGCCGGCCATGAGATCCTGGGCCTAAAGACGGCTCCCCCCGCACACCAGCcacagccccagccccagccccccAGCTCCACAGCCTCCCCTGCTGCTGGTGGCTTCAAATCGGGCCACTGTAAGGGCACCTATGGCCTGCAAGGAGGGCTGCAGCCTATTGGGGAGCTGGCGGAGCGGGCTGGGACTGAGCAGAACAGTACCAGCAGGGGGAACCAGGGAAAGGATGGGACAAATGGAGGGAGTGGGGGAGGAGGCGGAGGGGGCGGGAGGAGCAGCAGTTGTAACAGCATGGCGGGGGGCTCGGGCTGTGGCTCTGTCAGCCTGGGCCTGTGTCTGGGTTTGGGCCTGGCACTGGAGGAGGAGACCTGCCCAGCCAGCCCCCCCACCGGCCCCCATCTGGATCAGGGCCCGCCCCACGGCCACGGCGACCCCACAGACCTCAGCCCCGGCGCCAACCCTGCACCCTTCCCCTGTCTATGCTGCCACCGCGGCTTCCAGACCTGCGCCCAGCTGCTACGCCACCAGCAGGGGGCCAACGCCAGCTTTGCAGAGGCAGGGGGGGAGTCGCTCTTCTACCACCGGCACCCTCCACCAGCCCCTGATGACCCCGACGCACCCCCAGAGAAGCTGCCcccgtcctcctcctccaactcctcttcctcttcctcctctgcttCTTCCCGCACCTCCCCTCCTTCTCCGCCTGCCCTTCCGCTCGCTCTAACTGGCCTCACTGCCGCCAAGAACAAAGCCAGGCACAGACACCGGCCCAGGGGCAGGCCCAAGCTGCtcactgggggtgggggtgggggtgggaggctGGCTGCCTCCAGAGAgggcagagggggagggggagggaagcCAGTTTTGCTCTATGCGTGTGAAGACTGCGGGCGGAAGTTCAAAGACGCCCCCACAAGGAACCGGCACCAGAGACTAGAACACTACGCTGaccaggaggaggaggaggaaggagggggagagggaggaagagggggacagggggaagagggaggggtggaggccagagagggaggagaggggagagatggagggcaggagaaggaggaggatgAGTCTGGGAGGGGTGTAGAGAGGAGccaggcagaggcagaggcagtcGAAGGCTTGCTGTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015159 True 1691 mRNA 0.61 4 3403474 3407541

Neighbor

gene id symbol gene type direction distance location
AMCG00015160 NA coding downstream 5322 3394887 ~ 3398152 (-)
AMCG00015156 NA coding downstream 44569 3351618 ~ 3358905 (-)
AMCG00015157 LOC103472502,LOC104927561,LOC103358743,LOC103394163,LOC108240267,LOC102201254 coding downstream 55887 3344374 ~ 3347587 (-)
AMCG00015158 NA coding downstream 90148 3303757 ~ 3313326 (-)
AMCG00015152 NA coding downstream 134713 3250981 ~ 3268761 (-)
AMCG00015161 NA coding upstream 1048 3408589 ~ 3414202 (-)
AMCG00015163 megf8,LOC104957441,LOC106633547,LOC102782412,LOC106605571 coding upstream 9311 3416852 ~ 3464811 (-)
AMCG00015169 NA coding upstream 408405 3815946 ~ 3825037 (-)
AMCG00015175 NA coding upstream 495287 3902828 ~ 3904532 (-)
AMCG00015174 NA coding upstream 542603 3950144 ~ 3968980 (-)
G95814 NA non-coding downstream 275882 3125431 ~ 3127592 (-)
G95798 NA non-coding downstream 409319 2993674 ~ 2994155 (-)
G95786 NA non-coding downstream 440129 2960335 ~ 2963345 (-)
G95778 NA non-coding downstream 457622 2943087 ~ 2945852 (-)
G95780 NA non-coding downstream 464379 2936294 ~ 2939095 (-)
G95933 NA non-coding upstream 64666 3472207 ~ 3472926 (-)
G95960 NA non-coding upstream 195063 3602604 ~ 3603677 (-)
G95957 LOC100846954 non-coding upstream 210232 3617773 ~ 3618298 (-)
G95968 NA non-coding upstream 322458 3729999 ~ 3730319 (-)
G95978 NA non-coding upstream 463535 3871076 ~ 3871334 (-)
G95921 NA other downstream 53032 3349879 ~ 3350442 (-)
G95854 NA other downstream 206285 3196421 ~ 3197189 (-)
G95850 lipe other downstream 214381 3186169 ~ 3189093 (-)
G95791 NA other downstream 423066 2978197 ~ 2980408 (-)
AMCG00015135 NA other downstream 511778 2887584 ~ 2891696 (-)
AMCG00015164 NA other upstream 196142 3603683 ~ 3607192 (-)
AMCG00015180 NA other upstream 702778 4110319 ~ 4123963 (-)
G96094 NA other upstream 767338 4174879 ~ 4180441 (-)
G96191 NA other upstream 1210170 4617711 ~ 4619264 (-)
AMCG00015203 NA other upstream 1370852 4778393 ~ 4802904 (-)

Expression


Co-expression Network