AMCG00015163 (megf8,LOC104957441,LOC106633547,LOC102782412,LOC106605571)


Basic Information

Item Value
gene id AMCG00015163
gene name megf8,LOC104957441,LOC106633547,LOC102782412,LOC106605571
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3416852 ~ 3464811 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015163
ATGTCCAACTCGCCGGACATCTTCATCAAGGACATGGACCGCGCCACGGGCATCCACAGGGGTCTGATCACCTACATCACAGTGTGGCGGCCGCAGACGGTGCTGATCGTGCAGGGGGTGCGGGACCTCATGGTCATCACCTTCCCCCACAAGGTGCACTCGCTCAAGTCCAGCCGCTTCTACATTGTCCTGAGGGGGGTGGGCAGGCATGCAGAGGGCCAGGCGGGGGAGTGTAAAGGGCACAGACAGGTTCTCAGGGGCCCCCCTGGCTATGTCACTGACGGCCCCGGAAACTACTCTGTGAATGGGAACTGCGAGTGGCTCATCGAGGCCCCCAGCAGTAGTTACCGTATCGTGCTGTCCTTCACCTTCATGGAGACAGAGTGCACCTATGACTACCTGTTTGTTGATGCCAACTACAACCTCCTGGGTTTCAATGCCTCCTTTCACTTCTCCGTCTGTCCGGGCGCATGCGGGGGCGGGGCCGGGCCAGGGGGCGTGGCCGGGCCAGGGAGTGTGGTCAGGGGCCGCTGTGACTCTGCCTCCGGACTGTGCCACTGCccgctggggtgggggggggctgatTGCAGCCGGCCCCTCTGCACGGACCGCTGCAGCCAGCACGGCGTGTGCAGCCAGCTGGGTCTCCGTGACAACGAGGGGCCGGGGCGCTGGTTCGAGGTCATCCGGAGTGACCCTGAATTTCGACCCCGTACCGCAGCCGCAGGCATCTACCTCTCCTCTACTGGTGCCCTCTATCTGTTCGGAGGGTTTGATCTGAACCGCCCACTGGGGGATCTGGTCAGATTCAACTTCACAACAAACCATTGGGAGAAGAGACCGCACACTTACAGCCCGgctgccAGGCACTCCCACACAGCTGTGGAGTGGGAAGGAAACATGGTGATTTTTGGAGGCGAACTGGCTGATGGCTCATTGGCCAACGATGTATGGCTGTACCGCCCCCTGAGTGATGATTGGCAGCAGCTCGGCCAATGGGACTCGCCCGGGGCACCTAAACTGGCAAATCACGCGGCTGCTCTGGCAGTGCTTCCAGCAGGAGGGCGGGCCCCCGCTGTGGCCGGGCACTCCATGGTATTCCACCCCCCCTCACGCACCCTGCTGGTGTAtgggggccacagacccaccaCTGCCaggttcaGTGTGCGTGTGAACTCCACGGACGTGTTCCATGTGGACCGCCAGTTCTGGTCCAGTTTCCGGTCCCGGTTCCCTGCCAGCGGGCCCAGAGAGAGAGCCTTCCACTCCGCCACTGTCATCGGCAACTACATGGTGGTGtatggggGGAATGTCCATATCCACTACCAGGAAGAGAAATGCTATGATGAGGAGATCTTCTTCTACCACCTGGGCTGCCACCACTGGTGTGAGGGGCGCTGTCGGGAGTACCAGCCCAGCGACCCATGTGGCAGTACAGGCTGTCTGGGGCTGTCGCGCTTCTTGTCAGACTGCCAGTCCTGCCTGGTCTTCGTCCCCGGCCTGCACCTGCTGACCTTCCAGCACCCCCGTAACGACTCCCAGCCCGACAAGgtgtcCATCGTGCGCAGTACGTCCATCACACTGAGCCCGTCCACAGAGACGGATGTCACACTGCAGTTCCGGGGCTTCCTGCACCCGCTGTGGGGccccccatcccctcccccccccgAGGGAGCACAGCTGTTCCAGAACCTGACCCGGGGCAGCCGGTACCTGCTGCAGGCCGAGGGCTACCTGAACAACACGGGTGGCGGGCAGACCAGCGAGATGGCACTGACCTGGAACAGGACAGCTGTGCCCGGgggcagtGAGATCTCCTTCCTCTTTCTCGAACCCTTTCGCTCGGACTCCTCTTGCTCCAACCACCCCTCCTGCCTGGCGTGCCTCTCTGACCAATCCTGTGGCTGGTGTTACCACAGCAACATCTGCCTGGCGCGCAGCGACCCCTCGGCCACTTGCGGGGACGGGGAGGAGGGGGACACGGCagtgggaggaggagggcggGGAGAGCGCCACCTGGCGTTGACTCCCTCTCACTGCATCCTGTGTGAGGACTACAGAGACTGCACGGCCTGCAGCCAGGACCCTTACTGTGAGTGGCAGATCAGCTCCAGCAAGAAGGGCGATTACCAATGTAGCCGGCGGGGGAGATTGGAAGGGTCCATTCGTGACCCAGGGGGGTGTCCCAAAGTCTGCAACCAagagcgggagggagagcaggagagggagcCAGGCCTAGCTCTGTGGTGGTACCCGGGCTGCCCGGACGTGGAGGAGTGTCGCCTGGGCCTGCACCACTGCCACCCTGACGCTGCCTGCGTCAACACGCCCAGCGCCTATGAGTGCCACTGTGAGAGGGGCTACACTGGGGATGGGCTGCTGCACTGCAACAGGACTTGCTATAATGAGTGTCGTCATGGACGCTGTAGCGGCCCCCCCGATTTTGAGTGCCAGTGTGACCTGGGCTGGAGCTCCGATGGCGCAACATTGGCCCTCAGTGGTGTGGAGTGTGACGTGGACTGCCTGTGTAACTTCCACAGCACCTGCCTGTCAGGCCCTGGGGTCTGTGACCAGTGCCAggACTGGACAGAGGGTGCGCAGTGTGAGCGCTGCCTGTCGGGCAGTTTCGGCAGTGCGGTGTCGAGGGGGGGCTGCGTGCCCTGCCAGTGTAACGGACACGGGGACCTGACCAGGGGGTACTGCGACCCCCAGACCGGGCACTGCCACTGCGCCCAGCACACCGAGGGGCAGCACTGCGAGCGCTGCAGCCCCGGCTACTATGGGGACCCCCGCCTCCTCGCCATCCTCCTCCGCGCTGGGCTGCCAGGGCTTATCCCCGGAGCCGCGGGGCCTGACCCACTGCCTGAGCTGTCCCCCTGCCTCCCCGGGCCCCACTGCCCTCCCATTGCCCTGACACTGCTCCCAGACTCTCACACTCTCTGCACGAGCTCCTACGTGTACGTGTTCGACGGCCTGCCCCGCTTCCTTAGCAATGGCGTTGTGCTCTCTGACCACAACCTGATTGGTGCTTTCTGTGGGACCAACCGcaagcagccaatcacagtggagGCCATagaggtggagggggaggaggagataAGTGGAATTGCCCGGGGGGGCCGTTGGGGGGCACACTGTGGCCGGACTGTCTGTCCCCGAGACTGTGGAGCCACAGAAGGAAGAGGAATGTGCAAcatgTCTCTGGGCATGTGTGTCTGCACTCCCGGCTTTGGCGGCTCCGACTGCTCCTCCCCCGTGGACTCCTCCTCCGTCGTCTGGGAAACGCTGCTGGACACACAGCTCACCTTGaatcAGGCTCACAGGTTCCTGCAGCGACTGGCACACTCAATGGTGGAGGGGCCAGATGGGACACTCTGGATTCCTCGTTACTACCACGCCTCCTGCTACGTACCCAATCAGAACGCCATGTTTGTGGTGGGTGGGCTCACTCGGCGGGGAGTCGTGGCCGCAGACATGTGGAGCCTCAATCTGAGCAGCCTGGTCTGGAGAGAGCACaagAGCTCTCTGCTGCCCCCAGTGGCAGGCCACACCCTGACATTGCGCCGGGGCTCCTCGCTGCTCCTGATTGGTGGATATTCCCCCGACAACGGCTTCAACCACCGTCTGCTGGAGTTCAGCCTGGAGACGGGCAACTGGAGTCCACTCTCTCGTTTCTTCCACGTGGCGGCGGTGCTGCAGGACACaatggtggtggtgggtggACGCACTGCGGAGGAGGACTCGGGGGGGCGGCTGTACCTGACGGGGGGGTTTAACGGTGTGGCGTTGGGCCGCATGCTGACCCTGACGCTGCCCTCTGACCCCTGCGCCCTACTGCGTGACCCCCCCACCTGCAACGCCACTATGTTTCCCGTCTCCGCGTCTCCCAGAGGACTGTCGCCGCTTGAAGAGCTGCAGCGAccGACCCTTCAGTGCAAGTGGTGCACTAACTGCCCCGAGGGGGCGTGCATCAGCAGCGCGGTCAGCTGCAGCTCGGAGCACGACTGCCGCATCAACCAGCGTGAGATCTTCGTGTCCAGCAACTGCTCCGAGACGGCCTGCGAGGCGTCCGACTGCCCCAAGTGCACCGCCTCGGGCAAGTGCATGTGGACACGCCAGTTCAAGCGCACAGGAGAGACGCGGCGGATCCTGAGTGTCAACCCCACGTATGACTGGACCTGCTTCAGCCACTCGCTGCTCAATGTGTCCCCCATGCACGTGGAGTCCAGCCCCCCCTTACCCTGTCCCCCTCCCTGCCACGCCCTGCACTCCTGCCATGCCTGCTTGGACTCCCGTGGTGCCGACGGGGGCTGGCAGCACTGCGTTTGGAGCCTGGCACTGCAGGagtgtctcagccCTTCCTTCCTGCCGCTGCGCTGTGAGGTGGGGCAATGCGGCCGGCTGCTATCCGGCTCCGAGCCCTGCTCCCCCCAGTGCTCCCAGTTCTCCCATGCATTGCCCAGCCGCAGTGTGGGTGGTGTGCCAGCAGGGGCCAGAACGGGGCAGGGCAGTGTCTGCAGGGGGGTCTGGATGGACTGCCAGGACACGCCCTTCGGATACGCCTGCACCTGCCGCCAGGGATACCTGCTGCACAAtgTGACGGGGCAGTGCCAGCCGGTCTGCACTCAGGGCTGTGTGAACGGCAGCTGTGTGGAGCCCGGCGTGTGCCGCTGCCACTTCGGCTACGTCGGCGCCAACTGCTCAGCAGAGTGCCGCTGCAACCGGCATAGTGACTGCGCTGGCATCGGGCGCCAGGATGTCTGTCTGCAGTGCCACAACAATACCATGAACAGCAGCACGGGTGACAAGTGTGACACCTGTCTGAGCGGCTACTTCCTGCTGAACGGACGCTGCCAGAAgtGTCAGTGTAACGGTCATGCAGACACCTGCAATGACCTGGACGGCACAGGCTGCCCCTGCCAGAACAACACTGAGGCGGCCAACTGCATCCCCTCTGACAGGAAGGAGTGCTACAGACAGCAGtgTGCCAAGTGCAAGGACTCCTTCAACGGCACGCCGGTGAATGGGCGCCAGTGCTACCGGCAGTTCAACGTGGACAGTGAATATTGCTTCGACCCCACCTCCCAGAGCAACTGCTTCCACGAGCCCAACATCCGCAACCTGCCCGCTGGCCGCACCGTCTTCTTCGCTGCCCAGCCCAAGTTCACCAATGTGGACATCCGGGTCACAGTGGACGTGACCTTCGGTGAGGTGGAACTGTACATGTCCAACTCGCCGGACACCTTCATCGTGGACGTGGACCGTGCCACGGGCATCCACACGGTGCTCAtcgaggaggagagggagaaggagagggagatcCCCTCCCCGATGAAAGGAGGAGGGTACGGCAACACGTCGTCCAGCTTCCACCtccccctgtccctctctcagcTGTCTGCGGGCGGATCCCACCACAACAACAGGGCCTCCCAGTCGGTGGCAGGAAGTGGAGGAGCCGGGGGCGGAGGGGGAGTGGGGATCGGGGGGATTGTCacaggagggggtgggggtgggggaggggagagaggacgAGAGATAAGGGAGGAGCGAGTGCAGGGCCTGATCACCTACATCACAGTGTGGCGGCCGCAGACGGTGCTGATTGTGCGGGGCGTGCGGGACCGCGTAGTCATCACCTTCCCCCACGAGGTGCACTCGCTCAAGTCCAGCCGCTTCTATATTGTCCTGAGGGGAGTGGGCAGGGATGCTGAAGGGGCAGGGGGAGGCCGGGCAGCCCCGGGCGAGTCGCAGGGGCTGTTGTTCCTGCGCCAGGACCAGGCCCACATCGACCTCTTCGTCTTCTTCTCGGTCTTCTTCTCCTGCTTCTTCCTGTTCTTGTCCGTCTGTGTGCTGCTCTGGAAGGTCAAGCAGTTCCTGGACTTCCGGCGGGAGCAGCGGCGCCACCTGCAGGAGATGACCAAGATGGCTTCGCGGCCCTTTGCCAAGCTCACCGTCTACCTGGAGCCCGAGGAGCCCCAGCTGGTCTACCTCCCCCCCTCCGCCGCCCTGCCCCCCCTCGGGAGCACCGGTAGCACGCGGACGGGCGGGGGCAAGGGAGGGCTGGGTGGGCTGGGGCGTGGGGTGGTGGTCGGGGGTGGCGGAGGGGGGTCCCGGGGGAGGCTGGGGGGGGGCTCGTCTTATGGGAAGCTGGACAGTCAGCCACCCTCAGGGGGTGGCGGAGGTCTGGGCAGCCAGCCCCTGCCCCTGCACTACCTGCACCAGTACGCCCATGCCCACtcgcaccaccaccaccaccccccctaccaccaccaccaccaccaccacccccccgccTCCACAGCCACTGCCCCGCCCCTCTCCCAGGGCCCCCACTACCATCAGTTCTGCCGCTCGGACCCCTTCCTGTCGCAGCTCATGGGCTTCTCCTACTGCTGCTTCAAGGTGGGGCCCATCACCCTGGAGCCCACTGATGACGGCATGGCTGGTGTGGCCACTGTGCTGCTCCAGCTGCCTGGCGGCATCCTGGCCCCCAACCGGGCCTGCCTGGGCTCGGCGCTGGTCACCCTGCGCCACAACCTACAGGAGTActgcgggggtggggggagcgGGAGTGGCAGCGGCTCCTCCTCGCAGCACCGCAAGGGCCTGCTGGGCCACCAGCACCTCACCACCATGTCCATGTGA

Function

symbol description
megf8 Predicted to enable GTP binding activity; GTPase activity; and calcium ion binding activity. Involved in left/right pattern formation. Acts upstream of or within cell migration involved in gastrulation; determination of left/right symmetry; and epiboly involved in gastrulation with mouth forming second. Predicted to be located in membrane. Predicted to be integral component of membrane. Used to study Carpenter syndrome. Human ortholog(s) of this gene implicated in Carpenter syndrome. Orthologous to human MEGF8 (multiple EGF like domains 8).

NR:

description
PREDICTED: multiple epidermal growth factor-like domains protein 8

GO: NA

KEGG:

id description
K23664 MEGF8; multipile epidermal growth factor-like domains protein 8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015163 True 6648 mRNA 0.64 41 3416852 3464811

Neighbor

gene id symbol gene type direction distance location
AMCG00015161 NA coding downstream 2650 3408589 ~ 3414202 (-)
AMCG00015159 NA coding downstream 9311 3403474 ~ 3407541 (-)
AMCG00015160 NA coding downstream 18700 3394887 ~ 3398152 (-)
AMCG00015156 NA coding downstream 57947 3351618 ~ 3358905 (-)
AMCG00015157 LOC103472502,LOC104927561,LOC103358743,LOC103394163,LOC108240267,LOC102201254 coding downstream 69265 3344374 ~ 3347587 (-)
AMCG00015169 NA coding upstream 351135 3815946 ~ 3825037 (-)
AMCG00015175 NA coding upstream 438017 3902828 ~ 3904532 (-)
AMCG00015174 NA coding upstream 485333 3950144 ~ 3968980 (-)
AMCG00015182 NA coding upstream 560843 4025654 ~ 4027415 (-)
AMCG00015178 NA coding upstream 572607 4037418 ~ 4039216 (-)
G95814 NA non-coding downstream 289260 3125431 ~ 3127592 (-)
G95798 NA non-coding downstream 422697 2993674 ~ 2994155 (-)
G95786 NA non-coding downstream 453507 2960335 ~ 2963345 (-)
G95778 NA non-coding downstream 471000 2943087 ~ 2945852 (-)
G95780 NA non-coding downstream 477757 2936294 ~ 2939095 (-)
G95933 NA non-coding upstream 7396 3472207 ~ 3472926 (-)
G95960 NA non-coding upstream 137793 3602604 ~ 3603677 (-)
G95957 LOC100846954 non-coding upstream 152962 3617773 ~ 3618298 (-)
G95968 NA non-coding upstream 265188 3729999 ~ 3730319 (-)
G95978 NA non-coding upstream 406265 3871076 ~ 3871334 (-)
G95921 NA other downstream 66410 3349879 ~ 3350442 (-)
G95854 NA other downstream 219663 3196421 ~ 3197189 (-)
G95850 lipe other downstream 227759 3186169 ~ 3189093 (-)
G95791 NA other downstream 436444 2978197 ~ 2980408 (-)
AMCG00015135 NA other downstream 525156 2887584 ~ 2891696 (-)
AMCG00015164 NA other upstream 138872 3603683 ~ 3607192 (-)
AMCG00015180 NA other upstream 645508 4110319 ~ 4123963 (-)
G96094 NA other upstream 710068 4174879 ~ 4180441 (-)
G96191 NA other upstream 1152900 4617711 ~ 4619264 (-)
AMCG00015203 NA other upstream 1313582 4778393 ~ 4802904 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_010733 megf8 coding NC_007127.7 CM002900.2 26380461 ~ 26437668 (-)
grasscarp (Ctenopharyngodon idella) CI01000027_06303377_06325512 MEGF8 coding CI01000027 null 6301533 ~ 6325512 (-)