AMCG00015164


Basic Information

Item Value
gene id AMCG00015164
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3603683 ~ 3607192 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015164
ATGGCAGTCACAGAGGATTACAACTATGAGGACAACTACGAATATGAAGAGGGGGACGACAACTTGACAGTCTTGTCCACCGCCGCGGCGCCCTGCACCCAGGAGGATGTGTGGCGGTTTGCGCAGCTGTACGCACCCGTGGTGTACCCGCTGGTCTGTGCTCTGGCAATTCTAGGTAACGGGCTGGTGCTAGGTGTGGTGTGGCGGTACCGGCTATCCCGGCGTGGCCGCTCCCCCTACGCTGGCCCTTGTGCCTTCTCCCTGACTGACACCTTCCTGCTGCACCTGTCCCTGTCTGACCTGCTGCTGGCCCTCACCCTGCCCTTCTATGCTGcgcagtgggggggtgggggaggctGGGTATTCGGGGGCACGACCTGCAAGTTGGCGGGGGCAGCCTTCTCGCTCAACCTCTACAGCGGCGTCCTGTTCCTTGCCTGCATCAGCTTTGACCGCTACCTGGCCATTGTGCATGCTCTGGGGGGGagtggtggtggaggaggcagGGGGCAGGGGCGGTGGCTGGGGCTGGGGGGAGTGCAGGGCTCGACACGCGCCCAGCTGACCTGCGCGGTCATCTGGGGCGGCTGTCTGTGCCTCTCTCTCGTGGATGTCTATTTCCGTCAGGTGACACCATTTCCCATGGTGGGGGGCACGGTGGGGTTGGAAGGGCGGCTGCTGTGCCACCGCAAATTCCACTGGGAGAACTCGGACCATTGGCGAGTTGGCCTGCAGttgctggggctggggctgggctTCCTGGTACCCCTGCTGGTCATGCTGTACTGCTACACGTGCATTTTCCGGTCCCTGTGCCTGGCCCCCCGCCCGCCCACGCAACGCCAGCGCTCCCTGCGACTCATCATCTCCATTGTGGGGGTCTTCCTGGTCTGCTGGGGACCCTACAATGGATTTCTCCTGACGGACAGCCTACAGCGGCTGGGGGTGGTGGGCAGGAGCTGCGCGCTGGACAAGGCACTGGACCTGGGCACCCTGGTGTCCGAGAGCCTGGCCCTCGCCCACTGTGCCCTCAACCCGTTGCTCTACGCCTTTGTGGGGGTCAAGTTCAGGCGCGAACTGGGCCACCTGGGAAAGGAGGCACTGGGGTGGTGCCGAGGGAAGAGCCGTAGAGGGGGCTGGGGCCGGAGAGGGTGGGGGAGTGACGGTGGAGGGAGGGGTCAGCGATCCACCAGAGTCTCGGAGCGCTCGCTGACGGCATCGGAGAGCGAGTCCTCAGCAATGTACTATTCTGTCAtggtgtga
>TU119671
cttcctctctctctctcactcacatcTGCTTCTCTGTGTCTCGTTGGCAGAGAGGTAGAGTGGACAGATGCTGAAAAACTGACCTCTTGACAACCATGGCAGTCACAGAGGATTACAACTATGAGGACAACTACGAATATGAAGAGGGGGACGACAACTTGACAGTCTTGTCCACCGCCGCGGCGCCCTGCACCCAGGAGGATGTGTGGCGGTTTGCGCAGCTGTACGCACCCGTGGTGTACCCGCTGGTCTGTGCTCTGGCAATTCTAGGTAACGGGCTGGTGCTAGGTGTGGTGTGGCGGTACCGGCTATCCCGGCGTGGCCGCTCCCCCTACGCTGGCCCTTGTGCCTTCTCCCTGACTGACACCTTCCTGCTGCACCTGTCCCTGTCTGACCTGCTGCTGGCCCTCACCCTGCCCTTCTATGCTGcgcagtggg

Function

GO:

id name namespace
GO:0042221 response to chemical biological_process
GO:0007166 cell surface receptor signaling pathway biological_process
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015164 True 1263 mRNA 0.64 2 3603683 3607097
TU119671 False 438 TUCP 0.59 2 3604603 3607192

Neighbor

gene id symbol gene type direction distance location
AMCG00015163 megf8,LOC104957441,LOC106633547,LOC102782412,LOC106605571 coding downstream 138872 3416852 ~ 3464811 (-)
AMCG00015161 NA coding downstream 189481 3408589 ~ 3414202 (-)
AMCG00015159 NA coding downstream 196142 3403474 ~ 3407541 (-)
AMCG00015160 NA coding downstream 205531 3394887 ~ 3398152 (-)
AMCG00015156 NA coding downstream 244778 3351618 ~ 3358905 (-)
AMCG00015169 NA coding upstream 208754 3815946 ~ 3825037 (-)
AMCG00015175 NA coding upstream 295636 3902828 ~ 3904532 (-)
AMCG00015174 NA coding upstream 342952 3950144 ~ 3968980 (-)
AMCG00015182 NA coding upstream 418462 4025654 ~ 4027415 (-)
AMCG00015178 NA coding upstream 430226 4037418 ~ 4039216 (-)
G95960 NA non-coding downstream 6 3602604 ~ 3603677 (-)
G95933 NA non-coding downstream 130757 3472207 ~ 3472926 (-)
G95814 NA non-coding downstream 476091 3125431 ~ 3127592 (-)
G95798 NA non-coding downstream 609528 2993674 ~ 2994155 (-)
G95786 NA non-coding downstream 640338 2960335 ~ 2963345 (-)
G95957 LOC100846954 non-coding upstream 10581 3617773 ~ 3618298 (-)
G95968 NA non-coding upstream 122807 3729999 ~ 3730319 (-)
G95978 NA non-coding upstream 263884 3871076 ~ 3871334 (-)
G96009 NA non-coding upstream 294620 3901812 ~ 4037171 (-)
G96010 NA non-coding upstream 296505 3903697 ~ 4039218 (-)
G95921 NA other downstream 253241 3349879 ~ 3350442 (-)
G95854 NA other downstream 406494 3196421 ~ 3197189 (-)
G95850 lipe other downstream 414590 3186169 ~ 3189093 (-)
G95791 NA other downstream 623275 2978197 ~ 2980408 (-)
AMCG00015135 NA other downstream 711987 2887584 ~ 2891696 (-)
AMCG00015180 NA other upstream 503127 4110319 ~ 4123963 (-)
G96094 NA other upstream 567687 4174879 ~ 4180441 (-)
G96191 NA other upstream 1010519 4617711 ~ 4619264 (-)
AMCG00015203 NA other upstream 1171201 4778393 ~ 4802904 (-)
AMCG00015210 NA other upstream 1360858 4968050 ~ 4976350 (-)

Expression


Co-expression Network