AMCG00015171


Basic Information

Item Value
gene id AMCG00015171
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3884470 ~ 3888917 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015171
ATGCTGGCTGTGGTGCAGGGGCTTCAGGGCCTGTGCGGGACGTTCCTGCCCTGTATCTTGGCGTGTAAGGTGGCGCAGGACCAGGATGAGAGCTGCTGCCTGCCCTTCCTACCTGGCGCGCTGATCGCCCTACGCACCCGAATCAGGGATATGTACGGCATTGGGggctcaGTGTGTGATGACTGGGTGGTGATGTCATGCTGCTCACTCTGTGGAATCTGTCAAATGGCTCGTGAGCAGAAGATGAGGCGCTGATCATGTGACCAGAAAGAGACAGTGTGAGCGTAgggtgggaggggggagaaCTCTCATACCCGAGGATCCCACAGCAGACACCCTCTACTCACCGCCCCATCTCTGGTCTCGCCCAGGGTGCAATAAATAGCAGAGCCAGGAAAATATTCTCCAGAGCACACCCACAATCTCACACTACCATACTAACCTATACACTACCCACATACTACACTTACACTGTGACACTAACCACTCACTAGTACCACACTCACACAgtaacactgacacacacaaacacacacacattcacacaaacaaacatcagtgtctcacacacacacacacacacacacaggcatacgACATACATGCtgcactaacacacacactactcacACAATCACATTGCTGCCATACTGCAGAAAATTTTAATCTCCCAGTCCGCTCTGTGCCTCAGTTTCCCTACAATGACTCTGAATCAGGGCTgtcgctctctctctatttaCTCACCTGGTAGGAGCTCTAATCAAAGGCAACTCACAGGTGCAGCACATTCAAGAATAAACTCAACTCCCCCCCAACAGGCATACCTTACCACCACAATACATCTATTGTACTACAactatgtttattattaatattattaactgctgctgtattattttatacatacatacgtacatatatacatacttacatatGCAGTATATGCACACATTAATATACAGACAGCAATTTCTCCAATAGGTGTGCATTCATTCTGGTGTGACAAATGAagagaaatattgaaaataaaataagattcaATTATTTGATATTAAAGTTTGTTAGTTCCCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015171 True 1072 mRNA 0.46 3 3884470 3888917

Neighbor

gene id symbol gene type direction distance location
AMCG00015168 NA coding upstream 62007 3794466 ~ 3822463 (+)
AMCG00015167 NA coding upstream 127598 3754064 ~ 3756872 (+)
AMCG00015165 NA coding upstream 152506 3726913 ~ 3731964 (+)
AMCG00015166 NA coding upstream 221058 3639362 ~ 3663412 (+)
AMCG00015162 NA coding upstream 328628 3554244 ~ 3555842 (+)
AMCG00015172 NA coding downstream 5874 3894791 ~ 3902338 (+)
AMCG00015176 NA coding downstream 181165 4070082 ~ 4112144 (+)
AMCG00015185 NA coding downstream 299550 4188467 ~ 4196925 (+)
AMCG00015183 hsc70,LOC108441346,LOC103045816,LOC108241987,LOC107675864,LOC107745199 coding downstream 309569 4198486 ~ 4213829 (+)
AMCG00015184 NA coding downstream 326827 4215744 ~ 4218912 (+)
G95977 NA non-coding upstream 13136 3871078 ~ 3871334 (+)
G95972 LOC103376870 non-coding upstream 73410 3810565 ~ 3811060 (+)
G95964 NA non-coding upstream 212800 3671389 ~ 3671670 (+)
G95950 NA non-coding upstream 283085 3601129 ~ 3601385 (+)
G95944 NA non-coding upstream 346134 3538132 ~ 3538336 (+)
G96059 NA non-coding downstream 345754 4234671 ~ 4283832 (+)
G96061 NA non-coding downstream 355470 4244387 ~ 4299500 (+)
G96063 NA non-coding downstream 362746 4251663 ~ 4255472 (+)
G96060 NA non-coding downstream 404142 4293059 ~ 4296312 (+)
G96072 NA non-coding downstream 410989 4299906 ~ 4300232 (+)
G95955 NA other upstream 242270 3641940 ~ 3642200 (+)
AMCG00015142 NA other upstream 913125 2965301 ~ 2971345 (+)
G95704 NA other upstream 1053849 2820467 ~ 2830621 (+)
G95693 NA other upstream 1075975 2806811 ~ 2808495 (+)
G95624 NA other upstream 1218344 2664504 ~ 2666126 (+)
AMCG00015170 NA other downstream 14782 3903699 ~ 3916734 (+)
AMCG00015173 NA other downstream 44999 3933916 ~ 3949420 (+)
G95992 NA other downstream 80912 3969829 ~ 3971683 (+)
G96030 NA other downstream 200284 4089201 ~ 4100140 (+)
AMCG00015197 NA other downstream 694780 4583697 ~ 4667058 (+)

Expression


Co-expression Network