AMCG00015175


Basic Information

Item Value
gene id AMCG00015175
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 3902828 ~ 3904532 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00015175
TTGCAGTGCAGGGAGGTTGCAGGGCAACTGCGACAGATTGATGTCAGCGCAGGGCAGGTTTTCGGCACCAATACAGCTGACGCCATCTTCACCCTGTATGGGGGCACCTGGACTCAGCTGCCCGGGGCACTCAAGCATGAAGCCACAGTGGGGTACAAGGGCCCTGGTTCCCCCTTCCACTGGCAGGGCCTCCCGGGGGCTCTCAAGTACTACAGCTGTGGGCCCCTGGGCTGCTGGGGGGTGAACGCCACCGAAGACATCTTCGTGAGGAAGGGGGTGTCTCCACAGCAGTGCCAGGGAACATGGGATTGGCAGCAGGTGGACGGGAAACTGTCCATGATAGAGGAATGGGATCACTAGTAATAACCCTGTGGGCACTGGCTGGACCCCACTAATCATGTGTGCGAAAAGCAAGCATGTGTCCTTTGACCTGGGTCATCTGTGGGTCATCACCCAAGATAACCGGATCTTGGACTGCAGCTGAGCGCTCACAGCCACAGACCCCAcagctttctttgttttggcaataaatattaatatatatatatatatatatatatatatatacata

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00015175 True 571 mRNA 0.54 3 3902828 3904532

Neighbor

gene id symbol gene type direction distance location
AMCG00015169 NA coding downstream 77791 3815946 ~ 3825037 (-)
AMCG00015163 megf8,LOC104957441,LOC106633547,LOC102782412,LOC106605571 coding downstream 438017 3416852 ~ 3464811 (-)
AMCG00015161 NA coding downstream 488626 3408589 ~ 3414202 (-)
AMCG00015159 NA coding downstream 495287 3403474 ~ 3407541 (-)
AMCG00015160 NA coding downstream 504676 3394887 ~ 3398152 (-)
AMCG00015174 NA coding upstream 45612 3950144 ~ 3968980 (-)
AMCG00015182 NA coding upstream 121122 4025654 ~ 4027415 (-)
AMCG00015178 NA coding upstream 132886 4037418 ~ 4039216 (-)
AMCG00015181 NA coding upstream 226870 4131402 ~ 4163989 (-)
AMCG00015179 NA coding upstream 262829 4167361 ~ 4169016 (-)
G95978 NA non-coding downstream 31494 3871076 ~ 3871334 (-)
G95968 NA non-coding downstream 172509 3729999 ~ 3730319 (-)
G95957 LOC100846954 non-coding downstream 284530 3617773 ~ 3618298 (-)
G95960 NA non-coding downstream 299151 3602604 ~ 3603677 (-)
G95933 NA non-coding downstream 429902 3472207 ~ 3472926 (-)
G96018 NA non-coding upstream 65286 3969818 ~ 3970756 (-)
G96110 ctrl,LOC103045314,LOC108277669,LOC108441368,LOC107745200,LOC102296088 non-coding upstream 311195 4215727 ~ 4216894 (-)
G96115 NA non-coding upstream 347350 4251882 ~ 4255484 (-)
G96125 NA non-coding upstream 397100 4301632 ~ 4301940 (-)
G96127 NA non-coding upstream 410161 4314693 ~ 4314916 (-)
AMCG00015164 NA other downstream 295636 3603683 ~ 3607192 (-)
G95921 NA other downstream 552386 3349879 ~ 3350442 (-)
G95854 NA other downstream 705639 3196421 ~ 3197189 (-)
G95850 lipe other downstream 713735 3186169 ~ 3189093 (-)
G95791 NA other downstream 922420 2978197 ~ 2980408 (-)
AMCG00015180 NA other upstream 205787 4110319 ~ 4123963 (-)
G96094 NA other upstream 270347 4174879 ~ 4180441 (-)
G96191 NA other upstream 713179 4617711 ~ 4619264 (-)
AMCG00015203 NA other upstream 873861 4778393 ~ 4802904 (-)
AMCG00015210 NA other upstream 1063518 4968050 ~ 4976350 (-)

Expression


Co-expression Network